Evidence map›Paper›PMID 23092113›Full record

ArticleJournal of the American Chemical Society2012

Photocleavable DNA barcode-antibody conjugates allow sensitive and multiplexed protein analysis in single cells.

Sarit S Agasti, Monty Liong, Vanessa M Peterson, Hakho Lee, Ralph Weissleder

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Recent methodological advances towards single-cell proteomics.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2023
    Review
  7. PhotocleavableChemical reviews · 2023
    Review
  8. Article
  9. Article
  10. Article
  11. Multiplexed Single-Cell in Situ Protein Profiling.ACS measurement science au · 2022
    Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Single-cell proteomic analysis.WIREs mechanisms of disease · 2021
    Review
  17. Review
  18. Deterministic droplet codingLab on a chip · 2020
    Article
  19. A Cleavable CJournal of the American Chemical Society · 2020
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sarit S AgastiCenter for Systems Biology, Massachusetts General Hospital/Harvard Medical, Boston, 02114, United States.
Monty Liong
Vanessa M Peterson
Hakho Lee
Ralph Weissleder

Funding

StatisticsP50CA086355 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI WEISSLEDER, MD, PHD, RALPH · 2000 to 2015
$27.8M
Novel Clickdyes for Biomedical SensingR01EB010011 · NIBIB · MASSACHUSETTS GENERAL HOSPITAL · PI WEISSLEDER, MD, PHD, RALPH · 2010 to 2017
$3.1M
NCI NIH HHS 2P50CA086355-12NCI NIH HHS P50 CA086355NHLBI NIH HHS HHSN268201000044CNIBIB NIH HHS R01 EB010011NIBIB NIH HHS R01EB010011
6 · The paper itself

Abstract

DNA barcoding is an attractive technology, as it allows sensitive and multiplexed target analysis. However, DNA barcoding of cellular proteins remains challenging, primarily because barcode amplification and readout techniques are often incompatible with the cellular microenvironment. Here we describe the development and validation of a photocleavable DNA barcode-antibody conjugate method for rapid, quantitative, and multiplexed detection of proteins in single live cells. Following target binding, this method allows DNA barcodes to be photoreleased in solution, enabling easy isolation, amplification, and readout. As a proof of principle, we demonstrate sensitive and multiplexed detection of protein biomarkers in a variety of cancer cells.

Indexed as

DNA Barcoding, Taxonomic3T3 CellsAnimalsAntibodiesCell Line, TumorFluorescent DyesHumansMicePhotochemical ProcessesProteinsAntibodiesFluorescent DyesProteins

Identifiers

PMID23092113
PMCPMC3498844

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.