Evidence map›Paper›PMID 23091115›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2013

An epithelial-mesenchymal transition gene signature predicts resistance to EGFR and PI3K inhibitors and identifies Axl as a therapeutic target for overcoming EGFR inhibitor resistance.

Lauren Averett Byers, Lixia Diao, Jing Wang, Pierre Saintigny, Luc Girard, Michael Peyton, Li Shen, Youhong Fan, Uma Giri, Praveen K Tumula and 24 more

2 registry-linked trialsOpen access · greenAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 2 registered trials, which are not on this map. Cited by 681 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
681citing papers in PubMed, 2 pooled it
27.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02424617 phase1 / phase2completednot on this mapstarted 2015, after this paper: background citation

A Multi-Center Open-Label Phase 1/2 Study of BGB324 in Combination With Erlotinib in Patients With Stage IIIb or Stage IV Non-Small Cell Lung Cancer

TypeinterventionalSponsorBerGenBio ASARan2015 to 2021Enrolled40ConditionsNon-Small Cell Lung CancerArmsErlotinib, Bemcentinib
NCT02488408 phase1 / phase2completednot on this mapstarted 2014, after this paper: background citation

A Phase Ib/II Multicenter Open-label Study of BGB324 as a Single Agent and in Combination With Cytarabine or Decitabine in Patients With Acute Myeloid Leukemia or as a Single Agent in Patients With Myelodysplastic Syndrome

TypeinterventionalSponsorBerGenBio ASARan2014 to 2022Enrolled122ConditionsAcute Myeloid Leukemia, Myelodysplastic SyndromesArmsBemcentinib, Cytarabine, Decitabine
3 · Its place in the literature

Who cites it

681 citing papers in PubMed, 2 syntheses or guidelines pooled it, 1,115 citations in OpenAlex.

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  17. YAP1 Defines an Emergent, Plastic Population of Relapsed SCLC.Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer · 2026
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621 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

34 authors at 5 institutions in 1 country.

Lauren Averett ByersDepartment of Thoracic and Head and Neck Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Lixia Diao
Jing Wang
Pierre Saintigny
Luc Girard
Michael Peyton
Li Shen
Youhong Fan
Uma Giri
Praveen K Tumula
Monique B Nilsson
Jayanthi Gudikote
Hai Tran
Robert J G Cardnell
David J Bearss
Steven L Warner
Jason M Foulks
Steven B Kanner
Varsha Gandhi
Nancy Krett
Steven T Rosen
Edward S Kim
Roy S Herbst
George R Blumenschein
J Jack Lee
Scott M Lippman
K Kian Ang
Gordon B Mills
Waun K Hong
John N Weinstein
Ignacio I Wistuba
Kevin R Coombes
John D Minna
John V Heymach
Astex PharmaceuticalsHarold C. Simmons Comprehensive Cancer CenterNorthwestern University · USThe University of Texas MD Anderson Cancer Center · USTolero Pharmaceuticals (United States) · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
UNIVERSITY OF TEXAS--SPORE IN LUNG CANCERP50CA070907 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI GIBBONS, DON LYNN · 1996 to 2024
$57.4M
Targeting the PI3K Signaling Pathway in Endometrial CarcinomaP50CA098258 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI BODURKA, DIANE · 2003 to 2020
$32.0M
U OF TEXAS HLTH SCI CTR HOUSTON CENTER FOR CLINICAL AND TRANSLATIONAL SCIENCESUL1RR024148 · NCRR · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI MCPHERSON, DAVID D · 2006 to 2010
$27.9M
Integrative Pipeline for Analysis & Translational Application of TCGA Data (GDAC)U24CA143883 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI AKBANI, REHAN, MILLS, GORDON B. · 2009 to 2016
$10.6M
Markers and therapeutic strategies for overcoming chemoradiotherapy resistanceR01CA168484 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI HEYMACH, JOHN V. · 2011 to 2015
$1.4M
NCI NIH HHS 1 U24 CA143883NCI NIH HHS 5 P30 CA016672NCI NIH HHS 5 P50 CA070907NCI NIH HHS P30 CA016672NCI NIH HHS P50 CA070907NCI NIH HHS P50 CA098258NCI NIH HHS R01 CA168484NCI NIH HHS R01 CA168484-01NCI NIH HHS U24 CA143883NCRR NIH HHS UL1 RR024148
6 · The paper itself

Abstract

purposeEpithelial-mesenchymal transition (EMT) has been associated with metastatic spread and EGF receptor (EGFR) inhibitor resistance. We developed and validated a robust 76-gene EMT signature using gene expression profiles from four platforms using non-small cell lung carcinoma (NSCLC) cell lines and patients treated in the Biomarker-Integrated Approaches of Targeted Therapy for Lung Cancer Elimination (BATTLE) study. EXPERIMENTAL

designWe conducted an integrated gene expression, proteomic, and drug response analysis using cell lines and tumors from patients with NSCLC. A 76-gene EMT signature was developed and validated using gene expression profiles from four microarray platforms of NSCLC cell lines and patients treated in the BATTLE study, and potential therapeutic targets associated with EMT were identified.

resultsCompared with epithelial cells, mesenchymal cells showed significantly greater resistance to EGFR and PI3K/Akt pathway inhibitors, independent of EGFR mutation status, but more sensitivity to certain chemotherapies. Mesenchymal cells also expressed increased levels of the receptor tyrosine kinase Axl and showed a trend toward greater sensitivity to the Axl inhibitor SGI-7079, whereas the combination of SGI-7079 with erlotinib reversed erlotinib resistance in mesenchymal lines expressing Axl and in a xenograft model of mesenchymal NSCLC. In patients with NSCLC, the EMT signature predicted 8-week disease control in patients receiving erlotinib but not other therapies.

conclusionWe have developed a robust EMT signature that predicts resistance to EGFR and PI3K/Akt inhibitors, highlights different patterns of drug responsiveness for epithelial and mesenchymal cells, and identifies Axl as a potential therapeutic target for overcoming EGFR inhibitor resistance associated with the mesenchymal phenotype.

Indexed as

AnimalsAxl Receptor Tyrosine KinaseCarcinoma, Non-Small-Cell LungCell Line, TumorCluster AnalysisDrug Resistance, NeoplasmEpithelial-Mesenchymal TransitionErbB ReceptorsGene Expression ProfilingHumansLung NeoplasmsMiceNeoplasm MetastasisPhosphoinositide-3 Kinase InhibitorsProtein Kinase InhibitorsProteomeAxl Receptor Tyrosine KinaseErbB ReceptorsPhosphoinositide-3 Kinase InhibitorsProtein Kinase InhibitorsProteomeProto-Oncogene ProteinsReceptor Protein-Tyrosine Kinases

Identifiers

PMID23091115
PMCPMC3567921
OpenAlexW2169105660

What OpenQuestion holds

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Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.