Evidence map›Paper›PMID 23091036›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Conformation of receptor-bound visual arrestin.

Miyeon Kim, Sergey A Vishnivetskiy, Ned Van Eps, Nathan S Alexander, Whitney M Cleghorn, Xuanzhi Zhan, Susan M Hanson, Takefumi Morizumi, Oliver P Ernst, Jens Meiler and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
6.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 112 citations in OpenAlex.

  1. Review
  2. Protein Modeling with DEER Spectroscopy.Annual review of biophysics · 2025
    Review
  3. Arrestins: A Small Family of Multi-Functional Proteins.International journal of molecular sciences · 2024
    Review
  4. Article
  5. Article
  6. Article
  7. The Role of Arrestin-1 Middle Loop in Rhodopsin Binding.International journal of molecular sciences · 2022
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Nanodiscs: A toolkit for membrane protein science.Protein science : a publication of the Protein Society · 2021
    Review
  14. Article
  15. β-Arrestin2 oligomers impair the clearance of pathological tau and increase tau aggregates.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  16. Article
  17. Targeting arrestin interactions with its partners for therapeutic purposes.Advances in protein chemistry and structural biology · 2020
    Review
  18. The structural basis of the arrestin binding to GPCRs.Molecular and cellular endocrinology · 2019
    Review
  19. Article
  20. Article

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Miyeon KimJules Stein Eye Institute, Department of Ophthalmology, University of California, Los Angeles, CA 90095, USA.
Sergey A Vishnivetskiy
Ned Van Eps
Nathan S Alexander
Whitney M Cleghorn
Xuanzhi Zhan
Susan M Hanson
Takefumi Morizumi
Oliver P Ernst
Jens Meiler
Vsevolod V Gurevich
Wayne L Hubbell
Doheny Eye Institute · USUniversity of California, Los Angeles · USUniversity of Toronto · CAVanderbilt University · US

Funding

Vision Research Core at UCLAP30EY000331 · NEI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Xian-Jie Yang · 1985 to 2026
$16.8M
STRUCTURE/FUNCTION STUDIES OF VISUAL ARRESTINR01EY011500 · NEI · VANDERBILT UNIVERSITY · PI T M Iverson · 1997 to 2026
$12.3M
MOLECULAR BASIS OF MEMBRANE EXCITATIONR01EY005216 · NEI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI HUBBELL, WAYNE L · 1985 to 2019
$9.8M
MOLECULAR BIOPHYSICS TRAINING PROGRAM AT VANDERBILTT32GM008320 · NIGMS · VANDERBILT UNIVERSITY · PI CHAZIN, WALTER J. · 1989 to 2023
$7.9M
Membrane Protein Structure Elucidation from sparse NMR data (KAMP)R01GM080403 · NIGMS · VANDERBILT UNIVERSITY · PI MEILER, JENS · 2007 to 2019
$3.0M
Arrestin interactions with non-receptor binding partnersR01GM077561 · NIGMS · VANDERBILT UNIVERSITY · PI GUREVICH, VSEVOLOD V. · 2007 to 2015
$2.3M
Cheminformatics of Allosteric mGluR Modulation promotes Therapeutic DevelopmentR01MH090192 · NIMH · VANDERBILT UNIVERSITY · PI MEILER, JENS · 2010 to 2013
$1.5M
Conformational regulation of arrestin-mediated signalingR01GM081756 · NIGMS · VANDERBILT UNIVERSITY · PI GUREVICH, VSEVOLOD V. · 2008 to 2011
$1.5M
LeuT Membrane Transporter Dynamics Determined by EPR and Computational TechniquesF31MH086222 · NIMH · VANDERBILT UNIVERSITY · PI ALEXANDER, NATHAN · 2009 to 2011
$89k
MOLECULAR BASIS OF MEMBRANE EXCITATIONR37EY005216 · NEI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI HUBBELL, WAYNE L · 1990 to 1999
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NEI NIH HHS EY00331NEI NIH HHS EY005216NEI NIH HHS EY011500NEI NIH HHS P30 EY000331NEI NIH HHS R01 EY005216NEI NIH HHS R01 EY011500NEI NIH HHS R37 EY005216NIGMS NIH HHS GM077561NIGMS NIH HHS GM080403NIGMS NIH HHS GM081756NIGMS NIH HHS R01 GM077561NIGMS NIH HHS R01 GM080403NIGMS NIH HHS R01 GM081756NIGMS NIH HHS T32 GM008320NIMH NIH HHS F31 MH086222NIMH NIH HHS MH086222NIMH NIH HHS MH090192NIMH NIH HHS R01 MH090192
6 · The paper itself

Abstract

Arrestin-1 (visual arrestin) binds to light-activated phosphorylated rhodopsin (P-Rh*) to terminate G-protein signaling. To map conformational changes upon binding to the receptor, pairs of spin labels were introduced in arrestin-1 and double electron-electron resonance was used to monitor interspin distance changes upon P-Rh* binding. The results indicate that the relative position of the N and C domains remains largely unchanged, contrary to expectations of a "clam-shell" model. A loop implicated in P-Rh* binding that connects β-strands V and VI (the "finger loop," residues 67-79) moves toward the expected location of P-Rh* in the complex, but does not assume a fully extended conformation. A striking and unexpected movement of a loop containing residue 139 away from the adjacent finger loop is observed, which appears to facilitate P-Rh* binding. This change is accompanied by smaller movements of distal loops containing residues 157 and 344 at the tips of the N and C domains, which correspond to "plastic" regions of arrestin-1 that have distinct conformations in monomers of the crystal tetramer. Remarkably, the loops containing residues 139, 157, and 344 appear to have high flexibility in both free arrestin-1 and the P-Rh*complex.

Indexed as

ArrestinCrystallography, X-RayElectronsModels, MolecularMutant ProteinsPhosphorylationProtein BindingProtein MultimerizationProtein StabilityProtein Structure, SecondaryRhodopsinSequence DeletionSolutionsStaining and LabelingTemperatureArrestinMutant ProteinsRhodopsinSolutions

Identifiers

PMID23091036
PMCPMC3494953
OpenAlexW2165726219

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.