Evidence map›Paper›PMID 23089396›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2012

Antibodies to a superantigenic glycoprotein 120 epitope as the basis for developing an HIV vaccine.

Stephanie A Planque, Yukie Mitsuda, Yasuhiro Nishiyama, Sangeeta Karle, Stephane Boivin, Maria Salas, Mary-Kate Morris, Mariko Hara, Guangling Liao, Richard J Massey and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Stephanie A PlanqueDepartment of Pathology and Laboratory Medicine, Chemical Immunology Research Center, University of Texas Medical School at Houston, Houston, TX 77030, USA.
Yukie Mitsuda
Yasuhiro Nishiyama
Sangeeta Karle
Stephane Boivin
Maria Salas
Mary-Kate Morris
Mariko Hara
Guangling Liao
Richard J Massey
Carl V Hanson
Sudhir Paul
Texas Medical Center · USCalifornia Department of Public Health · USThe University of Texas Health Science Center at Houston · USBioscience Research · US

Funding

Nucleophilic Antibodies: Characterization and InductionR01AI067020 · NIAID · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI PAUL, SUDHIR · 2007 to 2011
$2.2M
gp120 covalent analogs as candidate HIV vaccinesR01AI058865 · NIAID · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI PAUL, SUDHIR · 2004 to 2008
$1.7M
Covalent Vaccine for HIVR41AI093261 · NIAID · COVALENT BIOSCIENCE, INC. · PI NISHIYAMA, YASUHIRO · 2011 to 2012
$600k
Proteolytic Antibody HIVcidesR21AI071951 · NIAID · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI PAUL, SUDHIR · 2006 to 2007
$384k
Development of monoclonal catalytic antibodies for HIV immunotherapyR41AI087527 · NIAID · COVALENT IMMUNOLOGY PRODUCTS, INC. · PI PLANQUE, STEPHANIE A. · 2010 to 2010
$173k
NIAID NIH HHS R01 AI058865NIAID NIH HHS R01 AI067020NIAID NIH HHS R01 AI085565NIAID NIH HHS R21 AI071951NIAID NIH HHS R41 AI087527NIAID NIH HHS R41 AI093261
6 · The paper itself

Abstract

Failure to induce synthesis of neutralizing Abs to the CD4 binding determinant (CD4BD) of gp120, a central objective in HIV vaccine research, has been alternately ascribed to insufficient immunogen binding to Abs in their germline V region configuration expressed as BCRs, insufficient adaptive mutations in Ab V regions, and conformational instability of gp120. We employed peptide analogs of gp120 residues 421-433 within the CD4BD (CD4BD(core)) to identify Abs produced without prior exposure to HIV (constitutive Abs). The CD4BD(core) peptide was recognized by single-chain Fv fragments from noninfected humans with lupus that neutralized genetically diverse strains belonging to various HIV subtypes. Replacing the framework region (FR) of a V(H)4-family single-chain Fv with the corresponding V(H)3-family FRs from single-chain Fv JL427 improved the CD4BD(core) peptide-binding activity, suggesting a CD4BD(core) binding site outside the pocket formed by the CDRs. Replacement mutations in the FR site vicinity suggested the potential for adaptive improvement. A very small subset of serum CD4BD(core)-specific serum IgAs from noninfected humans without autoimmune disease isolated by epitope-specific chromatography neutralized the virus potently. A CD4BD(core)-specific, HIV neutralizing murine IgM with H and L chain V regions (V(H) and V(L) regions) free of immunogen-driven somatic mutations was induced by immunization with a CD4BD(core) peptide analog containing an electrophilic group that binds B cells covalently. The studies indicate broad and potent HIV neutralization by constitutive Abs as an innate, germline-encoded activity directed to the superantigenic CD4BD(core) epitope that is available for amplification for vaccination against HIV.

Indexed as

AIDS VaccinesAmino Acid SequenceAnimalsAntibodies, NeutralizingCD4 AntigensEpitopesHIV-1HIV AntibodiesHIV Envelope Protein gp120HIV InfectionsHumansLupus Erythematosus, SystemicMiceMolecular Sequence DataNeutralization TestsRecombinant ProteinsAIDS VaccinesAntibodies, NeutralizingCD4 AntigensEpitopesHIV AntibodiesHIV Envelope Protein gp120Recombinant ProteinsSingle-Chain AntibodiesSuperantigens

Identifiers

PMID23089396
PMCPMC3755593
OpenAlexW2114057499

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.