Evidence map›Paper›PMID 23086447›Full record

ArticleNature immunology2012

Control of RelB during dendritic cell activation integrates canonical and noncanonical NF-κB pathways.

Vincent F-S Shih, Jeremy Davis-Turak, Monica Macal, Jenny Q Huang, Julia Ponomarenko, Jeffrey D Kearns, Tony Yu, Riku Fagerlund, Masataka Asagiri, Elina I Zuniga and 1 more

Open access · greenAbstract read
In one paragraph

Article in Nature immunology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 122 papers.

0numbers the graph read from it
0cells of the map it votes in
122citing papers in PubMed
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

122 citing papers in PubMed, 177 citations in OpenAlex.

  1. Trial
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. NF-κB in inflammation and cancer.Cellular & molecular immunology · 2025
    Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Mechanisms ofOpen medicine (Warsaw, Poland) · 2024
    Article
  15. Gut microbes · 2023
    Article
  16. Article
  17. Article
  18. Transcription factorZoological research · 2023
    Article
  19. Article
  20. Article

62 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Vincent F-S ShihSignaling Systems Laboratory, Department of Chemistry and Biochemistry and San Diego Center for Systems Biology, University of California, San Diego, La Jolla, California, USA.
Jeremy Davis-Turak
Monica Macal
Jenny Q Huang
Julia Ponomarenko
Jeffrey D Kearns
Tony Yu
Riku Fagerlund
Masataka Asagiri
Elina I Zuniga
Alexander Hoffmann
University of California, San Diego · USCenter for Systems Biology · USSan Diego Supercomputer Center · US

Funding

SYNTHETIC SYSTEMSP50GM085764 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HASTY, JEFF M, IDEKER, TREY · 2010 to 2018
$23.3M
Molecular Virology and Systems Biology Screening CoreP01AI090935 · NIAID · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI YOUNG, JOHN A T · 2010 to 2014
$20.4M
STRUCTURE AND STABILITY OF IKB/NF-KB COMPLEXESP01GM071862 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KOMIVES, ELIZABETH A. · 2006 to 2016
$14.9M
Inhibitory Pathways Underlying Viral Persistence In VivoR01AI081923 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Elina I Zuniga · 2009 to 2026
$6.6M
Regulation of signaling via the lkB-NF-kB interactionR01GM071573 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HOFFMANN, ALEXANDER · 2005 to 2013
$2.2M
The NF-kB signaling system as a regulator of B-cell activationR01AI083453 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HOFFMANN, ALEXANDER · 2010 to 2014
$1.7M
Transcription Factor-DNA Interactions: Structural Classification and PredictionR01GM085325 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PONOMARENKO, JULIA VLADIMIROVNA · 2008 to 2011
$1.1M
NIAID NIH HHS AI081923NIAID NIH HHS AI090935NIAID NIH HHS P01 AI090935NIAID NIH HHS R01 AI081923NIAID NIH HHS R01 AI083453NIGMS NIH HHS GM071573NIGMS NIH HHS GM085325NIGMS NIH HHS GM085763NIGMS NIH HHS P01 GM071862NIGMS NIH HHS P50 GM085764NIGMS NIH HHS R01 GM071573NIGMS NIH HHS R01 GM085325
6 · The paper itself

Abstract

The NF-κB protein RelB controls dendritic cell (DC) maturation and may be targeted therapeutically to manipulate T cell responses in disease. Here we report that RelB promoted DC activation not as the expected RelB-p52 effector of the noncanonical NF-κB pathway, but as a RelB-p50 dimer regulated by canonical IκBs, IκBα and IκBɛ. IκB control of RelB minimized spontaneous maturation but enabled rapid pathogen-responsive maturation. Computational modeling of the NF-κB signaling module identified control points of this unexpected cell type-specific regulation. Fibroblasts that we engineered accordingly showed DC-like RelB control. Canonical pathway control of RelB regulated pathogen-responsive gene expression programs. This work illustrates the potential utility of systems analyses in guiding the development of combination therapeutics for modulating DC-dependent T cell responses.

Indexed as

Lymphocyte ActivationAnimalsCell DifferentiationCell LineDendritic CellsFibroblastsGene Expression RegulationI-kappa B KinaseMiceMice, Inbred C57BLMice, KnockoutNF-kappa BProtein MultimerizationSignal TransductionToll-Like Receptor 2Toll-Like Receptor 4I-kappa B KinaseNF-kappa BRelb protein, mouseTlr2 protein, mouseTlr4 protein, mouseTlr9 protein, mouseToll-Like Receptor 2Toll-Like Receptor 4Toll-Like Receptor 9Transcription Factor RelB

Identifiers

PMID23086447
PMCPMC3634611
OpenAlexW1984387148

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.