Evidence map›Paper›PMID 23086298›Full record

ArticleNature chemical biology2012

Divergent allosteric control of the IRE1α endoribonuclease using kinase inhibitors.

Likun Wang, B Gayani K Perera, Sanjay B Hari, Barun Bhhatarai, Bradley J Backes, Markus A Seeliger, Stephan C Schürer, Scott A Oakes, Feroz R Papa, Dustin J Maly

Open access · greenAbstract read
In one paragraph

Article in Nature chemical biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 119 papers.

0numbers the graph read from it
0cells of the map it votes in
119citing papers in PubMed
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

119 citing papers in PubMed, 190 citations in OpenAlex.

  1. Review
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  12. Roles of X-box binding protein 1 in liver pathogenesis.Clinical and molecular hepatology · 2025
    Review
  13. Endoplasmic reticulum stress in non-small cell lung cancer.American journal of cancer research · 2025
    Review
  14. Article
  15. Article
  16. Dual RNase activity of IRE1 as a target for anticancer therapies.Journal of cell communication and signaling · 2023
    Review
  17. Review
  18. Review
  19. Article
  20. Review

59 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Likun WangDepartment of Medicine, University of California-San Francisco, San Francisco, California, USA.
B Gayani K Perera
Sanjay B Hari
Barun Bhhatarai
Bradley J Backes
Markus A Seeliger
Stephan C Schürer
Scott A Oakes
Feroz R Papa
Dustin J Maly
University of California, San Francisco · USSeattle University · USUniversity of Miami · USStony Brook University · USUniversity of Washington · US

Funding

New Molecular Probes For Protein KinasesR01GM086858 · NIGMS · UNIVERSITY OF WASHINGTON · PI MALY, DUSTIN J · 2008 to 2025
$5.5M
Cytoprotection of Beta Cells Through Modulation of Ire1Alpha FunctionR01DK080955 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PAPA, FEROZ R · 2009 to 2017
$3.0M
New Tools to Measure and Correct Endoplasmic Reticulum Stress in Single LivingDP2OD001925 · OD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PAPA, FEROZ R · 2007 to 2007
$2.3M
Signaling Cell Death from the Endoplasmic ReticulumR01CA136577 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI OAKES, SCOTT A. · 2009 to 2013
$1.6M
Conformational Dynamics of Protein Tyrosine Kinases Src and AblR00GM080097 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI SEELIGER, MARKUS A · 2010 to 2012
$742k
NCI NIH HHS R01 CA136577NIDDK NIH HHS R01 DK080955NIGMS NIH HHS R00 GM080097NIGMS NIH HHS R01 GM086858NIH HHS DP2 OD001925
6 · The paper itself

Abstract

Under endoplasmic reticulum stress, unfolded protein accumulation leads to activation of the endoplasmic reticulum transmembrane kinase/endoRNase (RNase) IRE1α. IRE1α oligomerizes, autophosphorylates and initiates splicing of XBP1 mRNA, thus triggering the unfolded protein response (UPR). Here we show that IRE1α's kinase-controlled RNase can be regulated in two distinct modes with kinase inhibitors: one class of ligands occupies IRE1α's kinase ATP-binding site to activate RNase-mediated XBP1 mRNA splicing even without upstream endoplasmic reticulum stress, whereas a second class can inhibit the RNase through the same ATP-binding site, even under endoplasmic reticulum stress. Thus, alternative kinase conformations stabilized by distinct classes of ATP-competitive inhibitors can cause allosteric switching of IRE1α's RNase--either on or off. As dysregulation of the UPR has been implicated in a variety of cell degenerative and neoplastic disorders, small-molecule control over IRE1α should advance efforts to understand the UPR's role in pathophysiology and to develop drugs for endoplasmic reticulum stress-related diseases.

Indexed as

Adaptor Proteins, Signal TransducingCatalysisCells, CulturedCross-Linking ReagentsDNA-Binding ProteinsDown-RegulationEndoplasmic Reticulum StressEndoribonucleasesHumansIntracellular Signaling Peptides and ProteinsIsoenzymesMolecular ConformationMutationPhosphorylationProtein Kinase InhibitorsProtein Serine-Threonine KinasesAdaptor Proteins, Signal TransducingCross-Linking ReagentsCTNNBIP1 protein, humanDNA-Binding ProteinsEndoribonucleasesERN1 protein, humanIntracellular Signaling Peptides and ProteinsIsoenzymesProtein Kinase InhibitorsProtein Serine-Threonine KinasesRegulatory Factor X Transcription FactorsRibonucleasesTranscription FactorsX-Box Binding Protein 1XBP1 protein, human

Identifiers

PMID23086298
PMCPMC3508346
OpenAlexW2142358502

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.