Evidence map›Paper›PMID 23086202›Full record

ArticleNature biotechnology2012

Engineering a thermoregulated intein-modified xylanase into maize for consolidated lignocellulosic biomass processing.

Binzhang Shen, Xueguang Sun, Xiao Zuo, Taran Shilling, James Apgar, Mary Ross, Oleg Bougri, Vladimir Samoylov, Matthew Parker, Elaina Hancock and 7 more

Abstract read
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In one paragraph

Article in Nature biotechnology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 86 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Use of the lignocellulose-degrading bacteriumBiotechnology for biofuels · 2020
    Article
  9. Article
  10. Biotechnological Applications of Protein Splicing.Current protein & peptide science · 2019
    Review
  11. Article
  12. Article
  13. Review
  14. Peptide backbone circularization enhances antifreeze protein thermostability.Protein science : a publication of the Protein Society · 2017
    Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 1 institution in 1 country.

Binzhang ShenAgrivida, Inc., Medford, Massachusetts, USA.
Xueguang Sun
Xiao Zuo
Taran Shilling
James Apgar
Mary Ross
Oleg Bougri
Vladimir Samoylov
Matthew Parker
Elaina Hancock
Hector Lucero
Benjamin Gray
Nathan A Ekborg
Dongcheng Zhang
Jeremy C Schley Johnson
Gabor Lazar
R Michael Raab
Agrivida (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant cellulosic biomass is an abundant, low-cost feedstock for producing biofuels and chemicals. Expressing cell wall-degrading (CWD) enzymes (e.g. xylanases) in plant feedstocks could reduce the amount of enzymes required for feedstock pretreatment and hydrolysis during bioprocessing to release soluble sugars. However, in planta expression of xylanases can reduce biomass yield and plant fertility. To overcome this problem, we engineered a thermostable xylanase (XynB) with a thermostable self-splicing bacterial intein to control the xylanase activity. Intein-modified XynB (iXynB) variants were selected that have <10% wild-type enzymatic activity but recover >60% enzymatic activity upon intein self-splicing at temperatures >59 °C. Greenhouse-grown xynB maize expressing XynB has shriveled seeds and low fertility, but ixynB maize had normal seeds and fertility. Processing dried ixynB maize stover by temperature-regulated xylanase activation and hydrolysis in a cocktail of commercial CWD enzymes produced >90% theoretical glucose and >63% theoretical xylose yields.

Indexed as

Body Temperature RegulationEndo-1,4-beta XylanasesGenetic EnhancementInteinsLigninPlants, Genetically ModifiedZea maysEndo-1,4-beta XylanasesLigninlignocellulose

Identifiers

PMID23086202
OpenAlexW2052354051

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.