Evidence map›Paper›PMID 23085175›Full record

ArticleJournal of molecular graphics & modelling2012

Teach-Discover-Treat (TDT): collaborative computational drug discovery for neglected diseases.

Johanna M Jansen, Wendy Cornell, Y Jane Tseng, Rommie E Amaro

Abstract read
In one paragraph

Article in Journal of molecular graphics & modelling, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Evaluating generalization in protein-ligand cofolding methods.Nature structural & molecular biology · 2026
    Article
  2. Review
  3. The Need for Continuing Blinded Pose- and Activity Prediction Benchmarks.Journal of chemical information and modeling · 2025
    Review
  4. Article
  5. Article
  6. Towards reproducible computational drug discovery.Journal of cheminformatics · 2020
    Review
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Johanna M JansenNovartis Institutes for Biomedical Research, Global Discovery Chemistry/Oncology, Infectious Diseases, and Exploratory Chemistry, Emeryville, CA 94608, USA. johanna.jansen@teach-discover-treat.org
Wendy Cornell
Y Jane Tseng
Rommie E Amaro

Funding

A Structural Systems Biology Approach to Drug DiscoveryDP2OD007237 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI AMARO, ROMMIE E · 2010 to 2015
$2.9M
NIH HHS DP2 OD007237
6 · The paper itself

Abstract

Teach-Discover-Treat (TDT) is an initiative to promote the development and sharing of computational tools solicited through a competition with the aim to impact education and collaborative drug discovery for neglected diseases. Collaboration, multidisciplinary integration, and innovation are essential for successful drug discovery. This requires a workforce that is trained in state-of-the-art workflows and equipped with the ability to collaborate on platforms that are accessible and free. The TDT competition solicits high quality computational workflows for neglected disease targets, using freely available, open access tools.

Indexed as

Interdisciplinary CommunicationMolecular Dynamics SimulationSoftwareCooperative BehaviorDrug DiscoveryHumansNeglected DiseasesWorkforce

Identifiers

PMID23085175
PMCPMC3508335

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.