Evidence map›Paper›PMID 23083716›Full record

ArticleBiophysical journal2012

Size of cell-surface Kv2.1 domains is governed by growth fluctuations.

Aubrey V Weigel, Philip D Fox, Elizabeth J Akin, Kari H Ecklund, Michael M Tamkun, Diego Krapf

Abstract read
In one paragraph

Article in Biophysical journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Pentameric assembly of the Kv2.1 tetramerization domain.Acta crystallographica. Section D, Structural biology · 2022
    Article
  3. Article
  4. Quantifying the dynamic interactions between a clathrin-coated pit and cargo molecules.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Aubrey V WeigelSchool of Biomedical Engineering, Colorado State University, Fort Collins, Colorado, USA.
Philip D Fox
Elizabeth J Akin
Kari H Ecklund
Michael M Tamkun
Diego Krapf

Funding

Kv2.1 membrane corrals:Regulators of K+ channel function and traffickingR01GM084136 · NIGMS · COLORADO STATE UNIVERSITY · PI TAMKUN, MICHAEL M. · 2009 to 2012
$1.6M
NIGMS NIH HHS R01 GM084136
6 · The paper itself

Abstract

The Kv2.1 voltage-gated potassium channel forms stable clusters on the surface of different mammalian cells. Even though these cell-surface structures have been observed for almost a decade, little is known about the mechanism by which cells maintain them. We measure the distribution of domain sizes to study the kinetics of their growth. Using a Fokker-Planck formalism, we find no evidence for a feedback mechanism present to maintain specific domain radii. Instead, the size of Kv2.1 clusters is consistent with a model where domain size is established by fluctuations in the trafficking machinery. These results are further validated using likelihood and Akaike weights to select the best model for the kinetics of domain growth consistent with our experimental data.

Indexed as

Cell MembraneHEK293 CellsHumansModels, TheoreticalProtein Structure, TertiaryProtein TransportShab Potassium ChannelsShab Potassium Channels

Identifiers

PMID23083716
PMCPMC3475390

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.