Evidence map›Paper›PMID 23083711›Full record

ArticleBiophysical journal2012

Bacterial thermotaxis by speed modulation.

Mahmut Demir, Hanna Salman

Abstract read
In one paragraph

Article in Biophysical journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Physics of microbial taxis and behaviours in response to various physical stimuli.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2025
    Review
  2. Article
  3. Review
  4. Review
  5. Quantification of Motility inFrontiers in microbiology · 2022
    Article
  6. Microrheology reveals microscale viscosity gradients in planktonic systems.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  7. Article
  8. A Factor Produced byBiomolecules · 2020
    Article
  9. Article
  10. Article
  11. Review
  12. Autonomous bacterial nanoswimmers target cancer.Journal of controlled release : official journal of the Controlled Release Society · 2017
    Article
  13. Article
  14. Putting life on ice: bacteria that bind to frozen water.Journal of the Royal Society, Interface · 2016
    Article
  15. The Role of Adaptation in Bacterial Speed Races.PLoS computational biology · 2016
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Mahmut DemirDepartment of Physics and Astronomy, School of Arts and Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Hanna Salman

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Naturally occurring gradients often extend over relatively long distances such that their steepness is too small for bacteria to detect. We studied the bacterial behavior in such thermal gradients. We find that bacteria migrate along shallow thermal gradients due to a change in their swimming speed resulting from the effect of temperature on the intracellular pH, which also depends on the chemical environment. When nutrients are scarce in the environment the bacteria's intracellular pH decreases with temperature. As a result, the swimming speed of the bacteria decreases with temperature, which causes them to slowly drift toward the warm end of the thermal gradient. However, when serine is added to the medium at concentrations >300 μM, the intracellular pH increases causing the swimming speed to increase continuously with temperature, and the bacteria to drift toward the cold end of the temperature gradient. This directional migration is not a result of bacterial thermotaxis in the classical sense, because the steepness of the gradients applied is below the sensing threshold of bacteria. Nevertheless, our results show that the directional switch requires the presence of the bacterial sensing receptors. This seems to be due to the involvement of the receptors in regulating the intracellular pH.

Indexed as

TemperatureEscherichia coliHydrogen-Ion ConcentrationLocomotionMembrane PotentialsSerineSerine

Identifiers

PMID23083711
PMCPMC3475339

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.