Evidence map›Paper›PMID 23082936›Full record

ArticleACS chemical biology2013

Transcriptional silencing by single-stranded RNAs targeting a noncoding RNA that overlaps a gene promoter.

Masayuki Matsui, Thazha P Prakash, David R Corey

Abstract readLetter
In one paragraph

Article in ACS chemical biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
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  3. Review
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  5. Article
  6. Argonaute 2-dependent Regulation of Gene Expression by Single-stranded miRNA Mimics.Molecular therapy : the journal of the American Society of Gene Therapy · 2016
    Article
  7. Review
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 1 country.

Masayuki Matsui
Thazha P Prakash
David R Corey
Ionis Pharmaceuticals (United States) · USSouthwestern Medical CenterSouthwestern Medical Center · US

Funding

Mechanisms of Compartmentalized cAMP SignalingR01DK073368 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Jin Zhang · 2006 to 2026
$7.6M
Recognition of Chromosomal DNA by Peptide Nucleic AcidsR01GM073042 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI COREY, DAVID R · 2005 to 2016
$3.5M
Creating a Genetically Encodable Nano-Compass to Navigate in Molecular NetworksDP1CA174423 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ZHANG, JIN · 2012 to 2014
$1.6M
Feedback and Crosstalk in Eukaryotic Chemotaxis- Administrative SupplementR01GM092930 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI INOUE, TAKANARI · 2010 to 2015
$1.6M
NCI NIH HHS DP1 CA174423NIDDK NIH HHS R01 DK073368NIGMS NIH HHS GM092930NIGMS NIH HHS R01 GM073042
6 · The paper itself

Abstract

RNAi using single-strand RNA would provide new options for therapeutic development and for investigating critical questions of mechanism. Using chemically modified single-strands, we test the hypothesis that single-stranded RNAs can engage the RNAi pathway and silence gene transcription. We find that a chemically modified single-stranded silencing RNA (ss-siRNA) designed to be complementary to a long noncoding RNA (lncRNA) requires argonaute protein, functions through the RNAi pathway, and inhibits gene transcription. These data expand the use of single-stranded RNA to cell nuclei.

Indexed as

Gene SilencingAnimalsBlotting, WesternModels, BiologicalPromoter Regions, GeneticRNA, Small InterferingRNA, UntranslatedTranscriptional ActivationRNA, Small InterferingRNA, Untranslated

Identifiers

PMID23082936
PMCPMC3909965
OpenAlexW1980881720

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.