Evidence map›Paper›PMID 23080263›Full record

ArticleMolecular genetics and genomics : MGG2012

The 5' untranslated region of the soybean cytosolic glutamine synthetase β(1) gene contains prokaryotic translation initiation signals and acts as a translational enhancer in plants.

Jose Luis Ortega, Olivia L Wilson, Champa Sengupta-Gopalan

Abstract read
In one paragraph

Article in Molecular genetics and genomics : MGG, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 45 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jose Luis OrtegaDepartment of Plant and Environmental Sciences, New Mexico State University, Las Cruces, NM 88003, USA.
Olivia L Wilson
Champa Sengupta-Gopalan
New Mexico State University · US

Funding

Translational Control in the Hepatitis C VirusS06GM008136 · NIGMS · NEW MEXICO STATE UNIVERSITY LAS CRUCES · PI KUEHN, GLENN D · 1989 to 2011
$23.2M
NIGMS NIH HHS S06 GM008136NIGMS NIH HHS S06 GM08136-32
6 · The paper itself

Abstract

Glutamine synthetase (GS) catalyzes the synthesis of glutamine from glutamate and ammonia. In plants, it occurs as two major isoforms, a cytosolic form (GS(1)) and a nuclear encoded chloroplastic form. The focus of this paper is to determine the role of the 5'UTR of a GS(1) gene. GS(1) gene constructs with and without its 5' and 3' UTRs, driven by a constitutive promoter, were agroinfiltrated into tobacco leaves and the tissues were analyzed for both transgene transcript and protein accumulation. The constructs were also tested in an in vitro transcription/translation system and in Escherichia coli. Our results showed that while the 3'UTR functioned in the destabilization of the transcript, the 5'UTR acted as a translation enhancer in plant cells but not in the in vitro translation system. The 5'UTR of the GS(1) gene when placed in front of a reporter gene (uidA), showed a 20-fold increase in the level of GUS expression in agroinfiltrated leaves when compared to the same gene construct without the 5'UTR. The 5'UTR-mediated translational enhancement is probably another step in the regulation of GS in plants. The presence of the GS(1) 5'UTR in front of the GS(1) coding region allowed for its translation in E. coli suggesting the commonality of the translation initiation mechanism for this gene between plants and bacteria.

Indexed as

5' Untranslated Regions3' Untranslated RegionsBase SequenceCytosolEscherichia coliGene Expression Regulation, EnzymologicGene Expression Regulation, PlantGenes, ReporterGlucuronidaseGlutamate-Ammonia LigaseGlycine maxMolecular Sequence DataNicotianaPeptide Chain Initiation, TranslationalPlants, Genetically ModifiedRNA, Messenger3' Untranslated Regions5' Untranslated RegionsGlucuronidaseGlutamate-Ammonia Ligaseglutamine synthetase IRNA, MessengerSoybean Proteins

Identifiers

PMID23080263
PMCPMC3881598
OpenAlexW2012973442

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.