Evidence map›Paper›PMID 23077276›Full record

ArticleProtein engineering, design & selection : PEDS2013

Functional fusions of T4 lysozyme in the third intracellular loop of a G protein-coupled receptor identified by a random screening approach in yeast.

Elizabeth Mathew, Fa-Xiang Ding, Fred Naider, Mark E Dumont

Abstract read
In one paragraph

Article in Protein engineering, design & selection : PEDS, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Elizabeth MathewDepartment of Biochemistry and Biophysics, University of Rochester School of Medicine and Dentistry, Rochester, NY 14642, USA.
Fa-Xiang Ding
Fred Naider
Mark E Dumont

Funding

PEPTIDE-CELL INTERACTIONS IN SACCHAROMYCES CEREVISIAER01GM022086 · NIGMS · COLLEGE OF STATEN ISLD ST. GEORGE CAMPUS · PI NAIDER, FRED R · 1985 to 2006
$2.5M
Genetic Optimization of Membrane Protein Production for CrystallizationR01GM084083 · NIGMS · UNIVERSITY OF ROCHESTER · PI DUMONT, MARK E. · 2009 to 2012
$1.3M
Peptide-Cell Interactions in Saccharomyces cerevisiaeR56GM022086 · NIGMS · COLLEGE OF STATEN ISLAND · PI NAIDER, FRED R · 2007 to 2007
$371k
NIGMS NIH HHS GM084083NIGMS NIH HHS GM22086
6 · The paper itself

Abstract

The insertion of a stable soluble protein into loops of transmembrane proteins has proved to be a successful approach for enhancing their stabilities and crystallization, and may also be useful in contexts where the inserted proteins can modulate or report on the activities of membrane proteins. While the use of T4 lysozyme to replace portions of the third intracellular loops of G protein-coupled receptors (GPCRs) has allowed determination of the structures of members of this important class of receptors, the creation of such fusion proteins generally leads to loss of signaling function of the resulting fusion protein, since the third intracellular loops of GPCRs play critical roles in their interactions with G proteins. We describe here a random screening approach allowing insertion of T4 lysozyme into diverse positions in the third loop of the yeast α-pheromone receptor, a GPCR encoded by the yeast STE2 gene. Insertions were accompanied by varying extents of deletion or duplication of the loop. A set of phenotypic screens allow detection of potentially rare variant receptors that are expressed, bind to agonist and are capable of signal transduction via activation of the cognate G protein. A large fraction of screened full-length receptor variants containing at least partial duplications of the loop on either side of the inserted T4 lysozyme retain the ability to activate the downstream signaling pathway in response to binding of ligand. However, we were unable to identify any receptors with truncated C-termini that retain significant signaling function in the presence of inserted T4 lysozyme. Our results establish the feasibility of creating functional receptors containing insertions of T4 lysozyme in their third intracellular loops.

Indexed as

Amino Acid SequenceBacteriophage T4Base SequenceGene LibraryIntracellular SpaceLigandsMolecular Sequence DataMuramidaseProtein EngineeringReceptors, G-Protein-CoupledRecombinant Fusion ProteinsSaccharomyces cerevisiaeLigandsMuramidaseReceptors, G-Protein-CoupledRecombinant Fusion Proteins

Identifiers

PMID23077276
PMCPMC3522383

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.