Evidence map›Paper›PMID 23076530›Full record

ArticleMolecular biology reports2013

Cloning, identification and expression analysis of ACC oxidase gene involved in ethylene production pathway.

Zohreh Jafari, Raheem Haddad, Ramin Hosseini, Ghasemali Garoosi

Abstract read
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In one paragraph

Article in Molecular biology reports, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Review
  3. Both TwoFrontiers in plant science · 2022
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Zohreh JafariDepartment of Agricultural Biotechnology, Imam Khomeini International University, P.O. Box 34149-288, Qazvin, Islamic Republic of Iran.
Raheem Haddad
Ramin Hosseini
Ghasemali Garoosi
Imam Khomeini International University · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

1-aminocyclopropane-1-carboxylic acid oxidase (ACO) enzyme is a member of the Fe II-dependent family of oxidases/oxygenases which require Fe(2+) as a cofactor, ascorbate as a cosubstrate and CO(2) as an activator. This enzyme catalyses the terminal step in the plant signaling of ethylene biosynthetic pathway. A 948 bp fragment of the ACO1 gene cDNA sequence was cloned from tomato (Lycopersicon esculentum) fruit tissues by using reverse transcriptase-polymerase chain reaction (RT-PCR) with two PCR primers designed according to the sequence of a tomato cDNA clone (X58273). The BLAST search showed a high level of similarity (77-98 %) between ACO1 and ACO genes of other plants. The calculated molecular mass and predicted isoelectric point of LeACO1 were 35.8 kDa and 5.13, respectively. The three-dimensional structure studies illustrated that the LeACO1 protein folds into a compact jelly-roll motif comprised of 8 α-helices, 12 β-strands and several long loops. The cosubstrate was located in a cofactor-binding pocket referred to as a 2-His-1-carboxylate facial triad. Semi-quantitative RT-PCR analysis of gene expression revealed that the LeACO1 was expressed in fruit tissues at different ripening stages.

Indexed as

Amino Acid OxidoreductasesAmino Acid SequenceBase SequenceBiosynthetic PathwaysCatalytic DomainEthylenesFruitGene ExpressionGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantModels, MolecularMolecular Sequence DataPhylogenyPlant ProteinsProtein Structure, SecondarySequence Analysis, DNA1-aminocyclopropane-1-carboxylic acid oxidaseAmino Acid OxidoreductasesethyleneEthylenesPlant Proteins

Identifiers

PMID23076530
OpenAlexW2095971854

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.