Evidence map›Paper›PMID 23076336›Full record

ArticleGenes and immunity2013

Reciprocal regulation of Rag expression in thymocytes by the zinc-finger proteins, Zfp608 and Zfp609.

N P Reed, M A Henderson, E M Oltz, T M Aune

Open access · bronzeAbstract read
In one paragraph

Article in Genes and immunity, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Inflammatory Cytokines That Enhance Antigen Responsiveness of Naïve CD8International journal of molecular sciences · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

N P ReedDepartment of Medicine, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.
M A Henderson
E M Oltz
T M Aune
Vanderbilt University · USWashington University in St. Louis · US

Funding

Immunobiology of Blood and Vascular Systems Training ProgramT32HL069765 · NHLBI · VANDERBILT UNIVERSITY · PI HAWIGER, JACK J · 2002 to 2016
$6.5M
Interdisciplinary Training Program in Lung ResearchT32HL094296 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Ray Stokes Peebles · 2008 to 2026
$6.3M
IFN GAMMA GENE REGULATION IN T CELLS AND NK CELLSR01AI044924 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI AUNE, THOMAS M. · 2000 to 2019
$5.8M
Accessibility Control of Antigen Receptor Gene AssemblyR01AI079732 · NIAID · WASHINGTON UNIVERSITY · PI OLTZ, EUGENE M · 2009 to 2013
$1.9M
Control of Thymocyte Development and Rag Expression by Zfp608R01AI074945 · NIAID · VANDERBILT UNIVERSITY · PI AUNE, THOMAS M. · 2009 to 2010
$775k
IFN-Gamma Gene Regulation in T Cells and NK CellsR56AI044924 · NIAID · VANDERBILT UNIVERSITY · PI AUNE, THOMAS M. · 2009 to 2009
$349k
NHLBI NIH HHS T32 HL069765NHLBI NIH HHS T32 HL094296NHLBI NIH HHS T32HL094296NIAID NIH HHS AI 044924NIAID NIH HHS AI 074945NIAID NIH HHS AI 079732NIAID NIH HHS R01 AI044924NIAID NIH HHS R01 AI074945NIAID NIH HHS R01 AI079732NIAID NIH HHS R56 AI044924
6 · The paper itself

Abstract

Recombination-activating gene 1 (Rag1) and Rag2 enzymes are required for T cell receptor assembly and thymocyte development. The mechanisms underlying the transcriptional activation and repression of Rag1 and Rag2 are incompletely understood. The zinc-finger protein, Zfp608, represses Rag1 and Rag2 expression when expressed in thymocytes blocking T-cell maturation. Here we show that the related zinc-finger protein, Zfp609, is necessary for Rag1 and Rag2 expression in developing thymocytes. Zfp608 represses Rag1 and Rag2 expression indirectly by repressing the expression of Zfp609. Thus, the balance of Zfp608 and Zfp609 plays a critical role in regulating Rag1 and Rag2 expression, which may manifest itself not only during development of immature thymocytes into mature T cells but also in generation of the T-cell arm of the adaptive immune system, which does not fully develop until after birth.

Indexed as

Gene Expression RegulationAnimalsDNA-Binding ProteinsHomeodomain ProteinsMiceMice, Inbred BALB CRepressor ProteinsThymocytesTrans-ActivatorsTranscriptional ActivationTranscription, GeneticZinc FingersDNA-Binding ProteinsHomeodomain ProteinsRAG-1 proteinRag2 protein, mouseRepressor ProteinsTrans-ActivatorsZfp608 protein, mouseZfp609 protein, mouse

Identifiers

PMID23076336
PMCPMC4028662
OpenAlexW1991737901

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.