Evidence map›Paper›PMID 23076153›Full record

ArticleThe Journal of biological chemistry2012

The structure of (-)-kaitocephalin bound to the ligand binding domain of the (S)-α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA)/glutamate receptor, GluA2.

Ahmed H Ahmed, Makoto Hamada, Tetsuro Shinada, Yasufumi Ohfune, Laksiri Weerasinghe, Philip P Garner, Robert E Oswald

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 11 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Ahmed H AhmedDepartment of Molecular Medicine, Cornell University, Ithaca, New York 14853, USA.
Makoto Hamada
Tetsuro Shinada
Yasufumi Ohfune
Laksiri Weerasinghe
Philip P Garner
Robert E Oswald
Osaka City University · JPCornell University · USWashington State University · US

Funding

Overall (pp. 40-62)P41GM103485 · NIGMS · CORNELL UNIVERSITY · PI CERIONE, RICHARD A. · 2012 to 2018
$15.5M
Dynamic properties of a glutamate binding domainR01GM068935 · NIGMS · CORNELL UNIVERSITY ITHACA · PI OSWALD, ROBERT E · 2005 to 2018
$3.4M
NIGMS NIH HHS GM103485NIGMS NIH HHS P41 GM103485NIGMS NIH HHS R01 GM068935NIGMS NIH HHS R01-GM068935
6 · The paper itself

Abstract

Glutamate receptors mediate the majority of excitatory synaptic transmission in the central nervous system, and excessive stimulation of these receptors is involved in a variety of neurological disorders and neuronal damage from stroke. The development of new subtype-specific antagonists would be of considerable therapeutic interest. Natural products can provide important new lead compounds for drug discovery. The only natural product known to inhibit glutamate receptors competitively is (-)-kaitocephalin, which was isolated from the fungus Eupenicillium shearii and found to protect CNS neurons from excitotoxicity. Previous work has shown that it is a potent antagonist of some subtypes of glutamate receptors (AMPA and NMDA, but not kainate). The structure of kaitocephalin bound to the ligand binding domain of the AMPA receptor subtype, GluA2, is reported here. The structure suggests how kaitocephalin can be used as a scaffold to develop more selective and high affinity antagonists for glutamate receptors.

Indexed as

alpha-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic AcidAnimalsBinding SitesBrainCrystallography, X-RayGlutamic AcidInhibitory Concentration 50LigandsModels, ChemicalModels, MolecularMolecular ConformationProtein BindingProtein ConformationProtein Structure, TertiaryPyrrolesRatsalpha-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic Acidglutamate receptor ionotropic, AMPA 2Glutamic AcidkaitocephalinLigandsPyrrolesReceptors, AMPA

Identifiers

PMID23076153
PMCPMC3510803
OpenAlexW2076017197

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.