Evidence map›Paper›PMID 23073768›Full record

ArticleMolecular biology reports2012

cDNA cloning, characterization and expression analysis of catalase in swimming crab Portunus trituberculatus: cDNA cloning and expression analysis of catalase gene of Portunus trituberculatus.

Ping Chen, Jitao Li, Ping Liu, Baoquan Gao, Qingyin Wang, Jian Li

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Article in Molecular biology reports, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Ping ChenKey Laboratory for Sustainable Utilization of Marine Fisheries Resources, Ministry of Agriculture, 106 Nanjing Road, Qingdao 266071, People's Republic of China.
Jitao Li
Ping Liu
Baoquan Gao
Qingyin Wang
Jian Li
Chinese Academy of Fishery Sciences · CNMinistry of Agriculture and Rural Affairs · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Catalase is an important antioxidant protein that protects organisms against various oxidative stresses by eliminating hydrogen peroxide. In the present study, a full-length cDNA sequence of catalase was cloned from the haemocytes of swimming crab Portunus trituberculatus by a reverse-transcription polymerase chain reaction (RT-PCR) and rapid amplification of cDNA end method. The catalase cDNA sequence contained 1,851 bp with an open reading frame of 1,551 bp encoding 516 amino acid residues. The conserved catalytic active residues His-71, Asn-144 and Tyr-354 were predicted in the amino acid sequence of P. trituberculatus catalase. The deduced catalase protein had a calculated molecular mass of 58.5 kDa with an estimated isoelectric point of 6.90. Multiple alignment analysis revealed that the deduced amino acid sequence of catalase shared high identity of 68-95 % with those of other species. Quantitative real-time RT-PCR analysis revealed that P. trituberculatus catalase transcript was strongly detected in haemocytes, hepatopancreas, heart, stomach, intestine, gill, ovary and muscle. The expression level of catalase transcripts both in haemocytes and hepatopancreas changed rapidly and dynamically after Vibrio alginolyticus challenging. These facts indicate that catalase was perhaps involved in the acute response against invading bacteria and was an inducible protein involved in the host innate immune response through elimination of H(2)O(2) in crab.

Indexed as

Amino Acid SequenceAnimalsArthropod ProteinsBase SequenceBrachyuraCatalaseCloning, MolecularDNA, ComplementaryGene ExpressionGene Expression Regulation, EnzymologicHemocytesHepatopancreasHost-Pathogen InteractionsImmunity, InnateIsoelectric PointMolecular Sequence DataArthropod ProteinsCatalaseDNA, Complementary

Identifiers

PMID23073768
OpenAlexW2329956864

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.