Evidence map›Paper›PMID 23073177›Full record

ArticleJournal of structural biology2012

Membrane association of the PTEN tumor suppressor: electrostatic interaction with phosphatidylserine-containing bilayers and regulatory role of the C-terminal tail.

Siddharth S Shenoy, Hirsh Nanda, Mathias Lösche

Abstract read
In one paragraph

Article in Journal of structural biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Spontaneous signal generation by an excitable system for cell migration.Frontiers in cell and developmental biology · 2024
    Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Structural and Dynamic Effects of PTEN C-Terminal Tail Phosphorylation.Journal of chemical information and modeling · 2022
    Article
  8. The orchestrated signaling by PI3Kα and PTEN at the membrane interface.Computational and structural biotechnology journal · 2022
    Review
  9. Binding of CaStructure (London, England : 1993) · 2021
    Article
  10. Article
  11. Review
  12. Article
  13. Structural Mechanisms of PTEN Regulation.Cold Spring Harbor perspectives in medicine · 2020
    Review
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. The PTEN Tumor Suppressor Forms Homodimers in Solution.Structure (London, England : 1993) · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Siddharth S ShenoyDepartment of Physics, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Hirsh Nanda
Mathias Lösche
National Institute of Standards and Technology · USCarnegie Mellon University · US

Funding

STRUCTURAL&FUNCTIONAL INESTIGATIONS OF AB OLIGOMER INTERACTION/SYNTHETIC MEMBRANEP01AG032131 · NIA · CARNEGIE-MELLON UNIVERSITY · PI DESEMO, MARKUS · 2009 to 2011
$1.9M
NIA NIH HHS 1P01 AG032131NIA NIH HHS P01 AG032131
6 · The paper itself

Abstract

The phosphatidylinositolphosphate phosphatase PTEN is the second most frequently mutated protein in human tumors. Its membrane association, allosteric activation and membrane dissociation are poorly understood. We recently reported PTEN binding affinities to membranes of different compositions (Shenoy et al., 2012, PLoS ONE 7, e32591) and a preliminary investigation of the protein-membrane complex with neutron reflectometry (NR). Here we use NR to validate molecular dynamics (MD) simulations of the protein and study conformational differences of the protein in solution and on anionic membranes. NR shows that full-length PTEN binds to such membranes roughly in the conformation and orientation suggested by the crystal structure of a truncated PTEN protein, in contrast with a recently presented model which suggested that membrane binding depends critically on the SUMOylation of the CBR3 loop of PTEN's C2 domain. Our MD simulations confirm that PTEN is peripherally bound to the bilayer surface and show slight differences of the protein structure in solution and in the membrane-bound state, where the protein body flattens against the bilayer surface. PTEN's C2 domain binds phosphatidylserine (PS) tightly through its CBR3 loop, and its phosphatase domain also forms electrostatic interactions with PS. NR and MD results show consistently that PTEN's unstructured, anionic C-terminal tail is repelled from the bilayer surface. In contrast, this tail is tightly tugged against the C2 domain in solution, partially obstructing the membrane-binding interface of the protein. Arresting the C-terminal tail in this conformation by phosphorylation may provide a control mechanism for PTEN's membrane binding and activity.

Indexed as

Molecular Dynamics SimulationBinding SitesHumansLipid BilayersNeutron DiffractionPhosphatidylcholinesPhosphatidylserinesProtein BindingProtein Structure, SecondaryProtein Structure, TertiaryPTEN PhosphohydrolaseScattering, Small AngleStatic Electricity1,2-oleoylphosphatidylcholineLipid BilayersPhosphatidylcholinesPhosphatidylserinesPTEN PhosphohydrolasePTEN protein, human

Identifiers

PMID23073177
PMCPMC3503488
OpenAlexW2031103678

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.