Evidence map›Paper›PMID 23072392›Full record

ArticleCurrent pharmaceutical biotechnology2012

High hydrostatic pressure activates transcription factors involved in Saccharomyces cerevisiae stress tolerance.

Fernanda Bravim, Lucas F da Silva, Diego T Souza, Soyeon I Lippman, James R Broach, A Alberto R Fernandes, Patricia M B Fernandes

Open access · greenAbstract read
In one paragraph

Article in Current pharmaceutical biotechnology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Fernanda BravimNúcleo de Biotecnologia, Centro de Ciências da Saúde, Universidade Federal do Espírito Santo, Vitória, ES, 29040-090, Brazil.
Lucas F da Silva
Diego T Souza
Soyeon I Lippman
James R Broach
A Alberto R Fernandes
Patricia M B Fernandes
Universidade Federal do Espírito Santo · BRPrinceton University · US

Funding

Ras and TOR Signaling in YeastR01GM076562 · NIGMS · PRINCETON UNIVERSITY · PI BROACH, JAMES R. · 2007 to 2019
$5.0M
NIGMS NIH HHS R01 GM076562
6 · The paper itself

Abstract

A number of transcriptional control elements are activated when Saccharomyces cerevisiae cells are submitted to various stress conditions, including high hydrostatic pressure (HHP). Exposure of Saccharomyces cerevisiae cells to HHP results in global transcriptional reprogramming, similar to that observed under other industrial stresses, such as temperature, ethanol and oxidative stresses. Moreover, treatment with a mild hydrostatic pressure renders yeast cells multistress tolerant. In order to identify transcriptional factors involved in coordinating response to high hydrostatic pressure, we performed a time series microarray expression analysis on a wild S. cerevisiae strain exposed to 50 MPa for 30 min followed by recovery at atmospheric pressure (0.1 MPa) for 5, 10 and 15 min. We identified transcription factors and corresponding DNA and RNA motifs targeted in response to hydrostatic pressure. Moreover, we observed that different motif elements are present in the promoters of induced or repressed genes during HHP treatment. Overall, as we have already published, mild HHP treatment to wild yeast cells provides multiple protection mechanisms, and this study suggests that the TFs and motifs identified as responding to HHP may be informative for a wide range of other biotechnological and industrial applications, such as fermentation, that may utilize HHP treatment.

Indexed as

Adaptation, PhysiologicalDNA, FungalFungal ProteinsGene Expression Regulation, FungalHydrostatic PressureMicroarray AnalysisRNA, FungalSaccharomyces cerevisiaeStress, PhysiologicalTranscription FactorsDNA, FungalFungal ProteinsRNA, FungalTranscription Factors

Identifiers

PMID23072392
PMCPMC4771372
OpenAlexW2116376573

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.