Evidence map›Paper›PMID 23071864›Full record

ArticleInternational journal of clinical and experimental pathology2012

Pathogenic characterization of a cervical lymph node derived from a patient with Kawasaki disease.

Harutaka Katano, Seiichi Sato, Tsuyoshi Sekizuka, Akiko Kinumaki, Hitomi Fukumoto, Yuko Sato, Hideki Hasegawa, Shigeru Morikawa, Masayuki Saijo, Tetsuya Mizutani and 1 more

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In one paragraph

Article in International journal of clinical and experimental pathology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Harutaka KatanoDepartment of Pathology, National Institute of Infectious Diseases, Toyama, Shinjuku-ku, Tokyo, Japan. katano@nih.go.jp
Seiichi Sato
Tsuyoshi Sekizuka
Akiko Kinumaki
Hitomi Fukumoto
Yuko Sato
Hideki Hasegawa
Shigeru Morikawa
Masayuki Saijo
Tetsuya Mizutani
Makoto Kuroda
National Institute of Infectious Diseases · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Kawasaki disease (KD) is the most common cause of multisystem vasculitis in childhood. Although cervical lymphadenitis is one of the major symptoms in KD, lymph node biopsy is rarely performed, because KD is usually diagnosed by clinical symptoms. A cervical lymph node biopsy was taken from a girl aged 1 year and 8 months who had suspected lymphoma, but she was diagnosed with KD after the biopsy. The cervical lymph node specimen was analyzed with multivirus real-time PCR that can detect >160 viruses, and unbiased direct sequencing with a next-generation DNA sequencer to detect potential pathogens in the lymph node. Histologically, focal necrosis with inflammatory cell infiltration, including neutrophils and macrophages, was observed in the marginal zone of the cervical lymph node, which was compatible with the acute phase of KD. Multivirus real-time PCR detected a low copy number of torque teno virus in the sample. Comprehensive direct sequencing of the cervical lymph node biopsy sample sequenced more than 8 million and 3 million reads from DNA and RNA samples, respectively. Bacterial genomes were detected in 0.03% and 1.79% of all reads in DNA and RNA samples, respectively. Although many reads corresponded to genomes of bacterial environmental microorganisms, Streptococcus spp. genome was detected in both DNA (77 reads) and RNA (2,925 reads) samples. Further studies are required to reveal any association of microbial or viral infection with the pathogenesis of KD.

Indexed as

Diagnosis, DifferentialDNA Virus InfectionsFemaleHumansImmunoglobulins, IntravenousInfantLymphadenitisLymph NodesLymphomaMucocutaneous Lymph Node SyndromeNeckNecrosisTorque teno virusTreatment OutcomeImmunoglobulins, IntravenousKawasaki diseaselymph nodemultivirus real-time PCRnext-generation sequencerstreptococcustorque teno virus

Identifiers

PMID23071864
PMCPMC3466979
OpenAlexW63864481

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.