Evidence map›Paper›PMID 23071446›Full record

ArticlePLoS genetics2012

Loss of Slc4a1b chloride/bicarbonate exchanger function protects mechanosensory hair cells from aminoglycoside damage in the zebrafish mutant persephone.

Dale W Hailey, Brock Roberts, Kelly N Owens, Andrew K Stewart, Tor Linbo, Remy Pujol, Seth L Alper, Edwin W Rubel, David W Raible

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.5field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Hair cell toxicology: With the help of a little fish.Frontiers in cell and developmental biology · 2022
    Review
  4. How Zebrafish Can Drive the Future of Genetic-based Hearing and Balance Research.Journal of the Association for Research in Otolaryngology : JARO · 2021
    Review
  5. Article
  6. Article
  7. Review
  8. Water Waves to Sound Waves: Using Zebrafish to Explore Hair Cell Biology.Journal of the Association for Research in Otolaryngology : JARO · 2019
    Review
  9. Article
  10. Article
  11. Sensory hair cell death and regeneration in fishes.Frontiers in cellular neuroscience · 2015
    Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Integrating zebrafish toxicology and nanoscience for safer product development.Green chemistry : an international journal and green chemistry resource : GC · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Dale W HaileyDepartment of Biological Structure, University of Washington, Seattle, Washington, USA.
Brock Roberts
Kelly N Owens
Andrew K Stewart
Tor Linbo
Remy Pujol
Seth L Alper
Edwin W Rubel
David W Raible
University of Washington · USBeth Israel Deaconess Medical Center · USInserm · FR

Funding

STRUCTURE-FUNCTION RELATIONSHIPS IN THE ALIMENTARY TRACTP30DK034854 · NIDDK · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WAYNE I LENCER · 1986 to 2026
$32.4M
UNIVERSITY OF WASHINGTON RESEARCH CORE CENTERP30DC004661 · NIDCD · UNIVERSITY OF WASHINGTON · PI RUBEL, EDWIN W · 2000 to 2014
$11.1M
Genetics of Zebrafish Hair Cell ToxicityR01DC005987 · NIDCD · UNIVERSITY OF WASHINGTON · PI RAIBLE, DAVID W · 2003 to 2023
$9.8M
Auditory Neuroscience Traning ProgramT32DC005361 · NIDCD · UNIVERSITY OF WASHINGTON · PI Adrian KC Lee, DAVID J PERKEL · 2002 to 2026
$8.8M
Research Training in OtolaryngologyT32DC000018 · NIDCD · UNIVERSITY OF WASHINGTON · PI STONE, JENNIFER S. · 1989 to 2023
$7.8M
MOLECULAR PHYSIOLOGY OF BAND 3 LIKE PROTEINS OF KIDNEYR37DK043495 · NIDDK · BETH ISRAEL DEACONESS MEDICAL CENTER · PI ALPER, SETH LEO · 1998 to 2007
$3.0M
Intelligent Imaging Spinning Disk Confocal MicroscopeS10RR026826 · NCRR · UNIVERSITY OF WASHINGTON · PI RAIBLE, DAVID W · 2010 to 2010
$500k
Intercellular trafficking of labeled aminoglycosides in living hair cellsR03DC012881 · NIDCD · UNIVERSITY OF WASHINGTON · PI HAILEY, DALE WARREN · 2012 to 2014
$456k
Determining how aminoglycoside-induced hair cell death is blocked F32DC010940 · NIDCD · UNIVERSITY OF WASHINGTON · PI HAILEY, DALE WARREN · 2010 to 2010
$50k
MOLECULAR PHYSIOLOGY OF BAND 3-LIKE PROTEINS OF KIDNEYR01DK043495 · NIDDK · BETH ISRAEL DEACONESS MEDICAL CENTER · PI ALPER, SETH LEO · 1991 to 1997
–
NCRR NIH HHS S10 RR026826NIDCD NIH HHS DC 005361NIDCD NIH HHS DC005987NIDCD NIH HHS DC010940NIDCD NIH HHS DC 18-26NIDCD NIH HHS F32 DC010940NIDCD NIH HHS P30 DC004661NIDCD NIH HHS R01 DC005987NIDCD NIH HHS R03 DC012881NIDCD NIH HHS T32 DC000018NIDCD NIH HHS T32 DC005361NIDDK NIH HHS DK34854NIDDK NIH HHS DK43495NIDDK NIH HHS P30 DK034854NIDDK NIH HHS R37 DK043495
6 · The paper itself

Abstract

Mechanosensory hair cell death is a leading cause of hearing and balance disorders in the human population. Hair cells are remarkably sensitive to environmental insults such as excessive noise and exposure to some otherwise therapeutic drugs. However, individual responses to damaging agents can vary, in part due to genetic differences. We previously carried out a forward genetic screen using the zebrafish lateral line system to identify mutations that alter the response of larval hair cells to the antibiotic neomycin, one of a class of aminoglycoside compounds that cause hair cell death in humans. The persephone mutation confers resistance to aminoglycosides. 5 dpf homozygous persephone mutants are indistinguishable from wild-type siblings, but differ in their retention of lateral line hair cells upon exposure to neomycin. The mutation in persephone maps to the chloride/bicarbonate exchanger slc4a1b and introduces a single Ser-to-Phe substitution in zSlc4a1b. This mutation prevents delivery of the exchanger to the cell surface and abolishes the ability of the protein to import chloride across the plasma membrane. Loss of function of zSlc4a1b reduces hair cell death caused by exposure to the aminoglycosides neomycin, kanamycin, and gentamicin, and the chemotherapeutic drug cisplatin. Pharmacological block of anion transport with the disulfonic stilbene derivatives DIDS and SITS, or exposure to exogenous bicarbonate, also protects hair cells against damage. Both persephone mutant and DIDS-treated wild-type larvae show reduced uptake of labeled aminoglycosides. persephone mutants also show reduced FM1-43 uptake, indicating a potential impact on mechanotransduction-coupled activity in the mutant. We propose that tight regulation of the ionic environment of sensory hair cells, mediated by zSlc4a1b activity, is critical for their sensitivity to aminoglycoside antibiotics.

Indexed as

MutationAmino Acid SequenceAminoglycosidesAnimalsAnion Exchange Protein 1, ErythrocyteBase SequenceCell MembraneChromosome MappingDrug ResistanceGenotypeHair Cells, AuditoryIonsMolecular Sequence DataNeomycinPhenotypeProtein TransportAminoglycosidesAnion Exchange Protein 1, ErythrocyteIonsNeomycinZebrafish Proteins

Identifiers

PMID23071446
PMCPMC3469417
OpenAlexW2134544241

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.