Evidence map›Paper›PMID 23071328›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Ocean acidification slows nitrogen fixation and growth in the dominant diazotroph Trichodesmium under low-iron conditions.

Dalin Shi, Sven A Kranz, Ja-Myung Kim, François M M Morel

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
8.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 126 citations in OpenAlex.

  1. Reduced NNature communications · 2026
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  5. Eukaryotic phytoplankton drive a decrease in primary production in response to elevated COProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Article
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  8. Diurnally dynamic iron allocation promotes NComputational and structural biotechnology journal · 2023
    Article
  9. NmSystems · 2022
    Article
  10. Review
  11. Electron & Biomass Dynamics ofFrontiers in microbiology · 2021
    Article
  12. Article
  13. Article
  14. Article
  15. Solar UV radiation in a changing world: roles of cryosphere-land-water-atmosphere interfaces in global biogeochemical cycles.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2019
    Article
  16. Environmental effects of ozone depletion, UV radiation and interactions with climate change: UNEP Environmental Effects Assessment Panel, update 2017.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2018
    Article
  17. Article
  18. An Integrated Response ofFrontiers in microbiology · 2018
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Dalin ShiState Key Laboratory of Marine Environmental Science, College of the Environment and Ecology, Xiamen University, Xiamen 361005, China. dshi@xmu.edu.cn
Sven A Kranz
Ja-Myung Kim
François M M Morel
Princeton University · USXiamen University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dissolution of anthropogenic CO(2) increases the partial pressure of CO(2) (pCO(2)) and decreases the pH of seawater. The rate of Fe uptake by the dominant N(2)-fixing cyanobacterium Trichodesmium declines as pH decreases in metal-buffered medium. The slower Fe-uptake rate at low pH results from changes in Fe chemistry and not from a physiological response of the organism. Contrary to previous observations in nutrient-replete media, increasing pCO(2)/decreasing pH causes a decrease in the rates of N(2) fixation and growth in Trichodesmium under low-Fe conditions. This result was obtained even though the bioavailability of Fe was maintained at a constant level by increasing the total Fe concentration at low pH. Short-term experiments in which pCO(2) and pH were varied independently showed that the decrease in N(2) fixation is caused by decreasing pH rather than by increasing pCO(2) and corresponds to a lower efficiency of the nitrogenase enzyme. To compensate partially for the loss of N(2) fixation efficiency at low pH, Trichodesmium synthesizes additional nitrogenase. This increase comes partly at the cost of down-regulation of Fe-containing photosynthetic proteins. Our results show that although increasing pCO(2) often is beneficial to photosynthetic marine organisms, the concurrent decreasing pH can affect primary producers negatively. Such negative effects can occur both through chemical mechanisms, such as the bioavailability of key nutrients like Fe, and through biological mechanisms, as shown by the decrease in N(2) fixation in Fe-limited Trichodesmium.

Indexed as

Oceans and SeasAcidsBacterial ProteinsCarbonCarbon CycleCarbon DioxideChlorophyllCyanobacteriaHydrogenHydrogen-Ion ConcentrationIronNitrogenNitrogenaseNitrogen FixationPartial PressureParticulate MatterAcidsBacterial ProteinsCarbonCarbon DioxideChlorophyllHydrogenIronNitrogenNitrogenaseParticulate MatterPhotosystem II Protein Complexphotosystem II, psbA subunitPhotosystem I Protein Complexphotosystem I, psaB subunit

Identifiers

PMID23071328
PMCPMC3494951
OpenAlexW2004371977

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.