Evidence map›Paper›PMID 23071276›Full record

ArticleBlood2012

IGHV-unmutated and IGHV-mutated chronic lymphocytic leukemia cells produce activation-induced deaminase protein with a full range of biologic functions.

Piers E M Patten, Charles C Chu, Emilia Albesiano, Rajendra N Damle, Xiao-Jie Yan, Dorothy Kim, Lu Zhang, Amanda R Magli, Jacqueline Barrientos, Jonathan E Kolitz and 7 more

Open access · greenAbstract read
In one paragraph

Article in Blood, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 54 citations in OpenAlex.

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  15. Chronic Lymphocytic Leukemia.Cold Spring Harbor perspectives in medicine · 2021
    Review
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  18. Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 2 countries.

Piers E M PattenThe Feinstein Institute for Medical Research, North Shore-Long Island Jewish Health System, Manhasset, NY 11030, USA.
Charles C Chu
Emilia Albesiano
Rajendra N Damle
Xiao-Jie Yan
Dorothy Kim
Lu Zhang
Amanda R Magli
Jacqueline Barrientos
Jonathan E Kolitz
Steven L Allen
Kanti R Rai
Sergio Roa
Patricia K Mongini
Thomas MacCarthy
Matthew D Scharff
Nicholas Chiorazzi
Northwell Health · USFeinstein Institute for Medical Research · USAlbert Einstein College of Medicine · USHofstra University · USLong Island Jewish Medical Center · USNorth Shore University Hospital · USStony Brook University · US

Funding

SOMATIC MUTATION OF IG VARIABLE REGIONSR01CA072649 · NCI · YESHIVA UNIVERSITY · PI SCHARFF, MATTHEW D · 1997 to 2014
$5.0M
Mismatch repair in V region mutation and isotype switchingR01CA102705 · NCI · YESHIVA UNIVERSITY · PI SCHARFF, MATTHEW D · 2003 to 2013
$3.2M
B CELL REPERTOIRES IN CHRONIC LYMPHOCYTIC LEUKEMIAR01CA081554 · NCI · NORTH SHORE UNIVERSITY HOSPITAL · PI CHIORAZZI, NICHOLAS · 2000 to 2012
$2.7M
Mismatch repair in V region mutation and isotype switchingR01AI112335 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI SCHARFF, MATTHEW D · 2014 to 2017
$1.5M
NCI NIH HHS R01 CA072649NCI NIH HHS R01 CA081554NCI NIH HHS R01 CA102705NCI NIH HHS R01 CA72649NCI NIH HHS R01 CA81554NIAID NIH HHS R01 AI112335
6 · The paper itself

Abstract

Clonal evolution occurs during the course of chronic lymphocytic leukemia (CLL) and activation-induced deaminase (AID) could influence this process. However, this possibility has been questioned in CLL because the number of circulating AID mRNA(+) cells is exceedingly low; synthesis of AID protein by blood CLL cells has not been demonstrated; the full range of AID functions is lacking in unmutated CLL (U-CLL), and no prospective analysis linking AID expression and disease severity has been reported. The results of the present study show that circulating CLL cells and those within secondary lymphoid tissues can make AID mRNA and protein. This production is related to cell division because more AID mRNA was detected in recently divided cells and AID protein was limited to the dividing fraction and was up-regulated on induction of cell division. AID protein was functional because AID(+) dividing cells exhibited more double-stranded DNA breaks, IGH class switching, and new IGHV-D-J mutations. Each of these actions was documented in U-CLL and mutated CLL (M-CLL). Furthermore, AID protein was associated with worse patient outcome and adverse cytogenetics. We conclude that the production of fully functional AID protein by U-CLL and M-CLL cells could be involved in clonal evolution of the disease.

Indexed as

AICDA (Activation-Induced Cytidine Deaminase)Base SequenceCell DivisionCells, CulturedCytidine DeaminaseDNA Breaks, Double-StrandedFlow CytometryGene Expression Regulation, EnzymologicGene Expression Regulation, LeukemicHumansImmunoglobulin Class SwitchingImmunoglobulin Heavy ChainsImmunoglobulin Variable RegionKaplan-Meier EstimateLeukemia, Lymphocytic, Chronic, B-CellLeukocytes, MononuclearAICDA (Activation-Induced Cytidine Deaminase)Cytidine DeaminaseImmunoglobulin Heavy ChainsImmunoglobulin Variable RegionRNA, Messenger

Identifiers

PMID23071276
PMCPMC3520620
OpenAlexW2010665178

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.