Evidence map›Paper›PMID 23065515›Full record

ArticleHaematologica2013

The role of a newly identified SET domain-containing protein, SETD3, in oncogenesis.

Zhangguo Chen, Catherine T Yan, Yali Dou, Sawanee S Viboolsittiseri, Jing H Wang

Open access · goldAbstract read
In one paragraph

Article in Haematologica, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
0.3field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 44 citations in OpenAlex.

  1. Review
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  13. Enzyme-free digital counting of endogenous circular RNA molecules in B-cell malignancies.Laboratory investigation; a journal of technical methods and pathology · 2018
    Article
  14. Review
  15. Article
  16. Article
  17. Writing, erasing and reading histone lysine methylations.Experimental & molecular medicine · 2017
    Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Zhangguo ChenIntegrated Department of Immunology, University of Colorado School of Medicine and National Jewish Health, Denver, CO, USA.
Catherine T Yan
Yali Dou
Sawanee S Viboolsittiseri
Jing H Wang
University of Colorado Denver · USBeth Israel Deaconess Medical Center · USNational Jewish Health · USUniversity of Michigan–Ann Arbor · US

Funding

Lig4R278H contribution to HSC and IgH class switching defects and malignanciesR01CA161151 · NCI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI YAN, CATHERINE T · 2013 to 2017
$1.8M
Mechanisms promoting translocations and mature B cell lymphomasR01CA166325 · NCI · UNIVERSITY OF COLORADO DENVER · PI WANG, JING HONG · 2012 to 2016
$1.7M
NCI NIH HHS R01 CA161151NCI NIH HHS R01 CA166325
6 · The paper itself

Abstract

The SET domain is found in histone methyltransferases and other lysine methyltransferases. SET domain-containing proteins such as MLL1 play a critical role in leukemogenesis, while others such as SETD2 may function as a tumor suppressor in breast cancer and renal cell carcinoma. We recently discovered that SETD3, a well-conserved SET domain-containing protein, was involved in a translocation to the immunoglobulin lambda light chain locus in one of the non-homologous end-joining/p53-deficient peripheral B-cell lymphomas. We showed that a truncated mRNA lacking the SET domain sequences in Setd3 gene was highly expressed in the lymphoma. Furthermore, we found that the truncated SET-less protein displayed oncogenic potential while the full length SETD3 protein did not. Finally, SETD3 exhibits histone methyltransferases activity on nucleosomal histone 3 in a SET-domain dependent manner. We propose that this newly identified Setd3 gene may play an important role in carcinogenesis.

Indexed as

AnimalsCell LineCell ProliferationCell Transformation, NeoplasticCloning, MolecularDNA End-Joining RepairHistone-Lysine N-MethyltransferaseHistone MethyltransferasesHistonesHumansLymphoma, B-CellMethylationMiceTumor Suppressor Protein p53Histone-Lysine N-MethyltransferaseHistone MethyltransferasesHistonesSETD3 protein, humanTumor Suppressor Protein p53

Identifiers

PMID23065515
PMCPMC3640118
OpenAlexW2168580605

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.