Evidence map›Paper›PMID 23065232›Full record

ArticleMolecular biology reports2013

Identification and characterization of promoter and regulatory regions for mouse Adam2 gene expression.

Heejin Choi, Boyeon Lee, Sora Jin, Jun Tae Kwon, Jihye Kim, Juri Jeong, Seungmin Oh, Byung-Nam Cho, Zee Yong Park, Chunghee Cho

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Article in Molecular biology reports, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Heejin ChoiSchool of Life Sciences, Gwangju Institute of Science and Technology, Gwangju, 500-712, Korea.
Boyeon Lee
Sora Jin
Jun Tae Kwon
Jihye Kim
Juri Jeong
Seungmin Oh
Byung-Nam Cho
Zee Yong Park
Chunghee Cho
Gwangju Institute of Science and Technology · KRCatholic University of Korea · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

ADAM2, a member of the 'a disintegrin and metalloprotease' (ADAM) family, is a key protein in mammalian fertilization that is specifically expressed in testicular germ cells. Here, we investigated the transcriptional regulation of the mouse Adam2 gene. An in silico analysis identified two conserved non-coding sequences located upstream of the mouse and human ADAM2 genes. The upstream region of the mouse Adam2 gene was found to lack typical TATA and CAAT boxes, and to have a high GC content. Our in vitro transient transfection-reporter analysis identified a promoter in this region of the mouse Adam2 gene, along with regulatory regions that inhibit the activity of this promoter in somatic cells. Site-directed mutagenesis revealed that the caudal-type homeobox 1 and CCTC-binding factor motifs are responsible for the inhibitory activities of the repressor regions. Finally, electrophoretic mobility shift assays showed putative transcription factor-promoter DNA complexes, and DNA-affinity chromatography and proteomic analyses identified myelin gene regulatory factor as a binding partner of the Adam2 promoter. This provides the first identification and characterization of promoter and repressor regions that regulate the transcription of the mouse Adam2 gene, and offers insights into the regulation of this germ-cell-specific gene.

Indexed as

Gene Expression Regulation, EnzymologicPromoter Regions, GeneticADAM ProteinsAnimalsBase SequenceBinding SitesElectrophoretic Mobility Shift AssayFertilinsGenes, ReporterHEK293 CellsHumansLuciferases, RenillaMaleMembrane GlycoproteinsMiceMolecular Sequence AnnotationADAM2 protein, humanAdam2 protein, mouseADAM ProteinsFertilinsLuciferases, RenillaMembrane Glycoproteinsmyelin gene regulatory factor, mouseTranscription Factors

Identifiers

PMID23065232
OpenAlexW1984782089

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.