Evidence map›Paper›PMID 23065055›Full record

ReviewPlanta2013

Complex RNA metabolism in the chloroplast: an update on the psbB operon.

Rhea Stoppel, Jörg Meurer

Open access · hybridAbstract readReview
In one paragraph

Review in Planta, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
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  7. Article
  8. Article
  9. Article
  10. Review
  11. The Genome and Transcriptome Analysis of thePlants (Basel, Switzerland) · 2020
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Rhea StoppelPlant Molecular Biology (Botany), Department Biology I, Ludwig Maximilians University, Großhadernerstrasse 2-4, Planegg-Martinsried, Germany. rstoppel@lbl.gov
Jörg Meurer
Lawrence Berkeley National Laboratory · USLudwig-Maximilians-Universität München · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Expression of most plastid genes involves multiple post-transcriptional processing events, such as splicing, editing, and intercistronic processing. The latter involves the formation of mono-, di-, and multicistronic transcripts, which can further be regulated by differential stability and expression. The plastid pentacistronic psbB transcription unit has been well characterized in vascular plants. It encodes the subunits CP47 (psbB), T (psbT), and H (psbH) of photosystem II as well as cytochrome b (6) (petB) and subunit IV (petD) of the cytochrome b (6) f complex. Each of the petB and petD genes contains a group II intron, which is spliced during post-transcriptional modification. The small subunit of photosystem II, PsbN, is encoded in the intercistronic region between psbH and psbT but is transcribed in the opposite direction. Expression of the psbB gene cluster necessitates different processing events along with numerous newly evolved specificity factors conferring stability to many of the processed RNA transcripts, and thus exemplarily shows the complexity of RNA metabolism in the chloroplast.

Indexed as

Evolution, MolecularOperonChloroplastsGene Expression Regulation, PlantGenes, PlantIntronsLight-Harvesting Protein ComplexesMultigene FamilyPhotosystem II Protein ComplexPhylogenyPlantsRNA, ChloroplastRNA EditingRNA, PlantRNA StabilitySigma FactorLight-Harvesting Protein Complexesphotosystem II, chlorophyll-binding protein, CP-47Photosystem II Protein ComplexRNA, ChloroplastRNA, PlantSig3 sigma factorSigma Factor

Identifiers

PMID23065055
PMCPMC3555233
OpenAlexW1989868656

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.