ArticleJournal of theoretical biology2013
Type of noise defines global attractors in bistable molecular regulatory systems.
Article in Journal of theoretical biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
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Who cites it
9 citing papers in PubMed.
- The Interplay Between Non-Instantaneous Dynamics of mRNA and Bounded Extrinsic Stochastic Perturbations for a Self-Enhancing Transcription Factor.Entropy (Basel, Switzerland) · 2026Article
- Application of Sensitivity Analysis to Discover Potential Molecular Drug Targets.International journal of molecular sciences · 2022Article
- Intrinsic Noise Profoundly Alters the Dynamics and Steady State of Morphogen-Controlled Bistable Genetic Switches.PLoS computational biology · 2016Article
- The role of stochastic gene switching in determining the pharmacodynamics of certain drugs: basic mechanisms.Journal of pharmacokinetics and pharmacodynamics · 2016Article
- Gene switching rate determines response to extrinsic perturbations in the self-activation transcriptional network motif.Scientific reports · 2016Article
- Bursting noise in gene expression dynamics: linking microscopic and mesoscopic models.Journal of the Royal Society, Interface · 2016Article
- Stochastic transitions in a bistable reaction system on the membrane.Journal of the Royal Society, Interface · 2013Article
- Toggle switch: noise determines the winning gene.Physical biology · 2013Article
- Stochastic stabilization of phenotypic States: the genetic bistable switch as a case study.PloS one · 2013Article
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3 authors.
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Abstract
The aim of this study is to demonstrate that in molecular dynamical systems with the underlying bi- or multistability, the type of noise determines the most strongly attracting steady state or stochastic attractor. As an example we consider a simple stochastic model of autoregulatory gene with a nonlinear positive feedback, which in the deterministic approximation has two stable steady state solutions. Three types of noise are considered: transcriptional and translational - due to the small number of gene product molecules and the gene switching noise - due to gene activation and inactivation transitions. We demonstrate that the type of noise in addition to the noise magnitude dictates the allocation of probability mass between the two stable steady states. In particular, we found that when the gene switching noise dominates over the transcriptional and translational noise (which is characteristic of eukaryotes), the gene preferentially activates, while in the opposite case, when the transcriptional noise dominates (which is characteristic of prokaryotes) the gene preferentially remains inactive. Moreover, even in the zero-noise limit, when the probability mass generically concentrates in the vicinity of one of two steady states, the choice of the most strongly attracting steady state is noise type-dependent. Although the epigenetic attractors are defined with the aid of the deterministic approximation of the stochastic regulatory process, their relative attractivity is controlled by the type of noise, in addition to noise magnitude. Since noise characteristics vary during the cell cycle and development, such mode of regulation can be potentially employed by cells to switch between alternative epigenetic attractors.
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