Evidence map›Paper›PMID 23063407›Full record

ArticleVirology2013

Rift Valley fever virus NSs inhibits host transcription independently of the degradation of dsRNA-dependent protein kinase PKR.

Birte Kalveram, Olga Lihoradova, Sabarish V Indran, Nandadeva Lokugamage, Jennifer A Head, Tetsuro Ikegami

Abstract read
In one paragraph

Article in Virology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 44 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Inhibition of PKR by Viruses.Frontiers in microbiology · 2021
    Review
  10. Article
  11. Article
  12. The Emergence of Severe Fever with Thrombocytopenia Syndrome Virus.The American journal of tropical medicine and hygiene · 2017
    Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Birte KalveramDepartment of Pathology, The University of Texas Medical Branch, 301 University Blvd. Galveston, TX 77555, USA.
Olga Lihoradova
Sabarish V Indran
Nandadeva Lokugamage
Jennifer A Head
Tetsuro Ikegami
The University of Texas Medical Branch at Galveston · US

Funding

WRCE Nonhuman Primate CoreU54AI057156 · NIAID · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI WALKER, DAVID H · 2003 to 2013
$102.6M
Reverse genetics to develop a second generation Rift Valley fever vaccineR01AI087643 · NIAID · UNIVERSITY OF TEXAS MED BR GALVESTON · PI IKEGAMI, TETSURO · 2011 to 2015
$1.9M
NIAID NIH HHS R01 AI087643NIAID NIH HHS R01 AI08764301-A1NIAID NIH HHS U54 AI057156
6 · The paper itself

Abstract

Rift Valley fever virus (RVFV) encodes one major virulence factor, the NSs protein. NSs suppresses host general transcription, including interferon (IFN)-β mRNA synthesis, and promotes degradation of the dsRNA-dependent protein kinase (PKR). We generated a novel RVFV mutant (rMP12-NSsR173A) specifically lacking the function to promote PKR degradation. rMP12-NSsR173A infection induces early phosphorylation of eIF2α through PKR activation, while retaining the function to inhibit host general transcription including IFN-β gene inhibition. MP-12 NSs but not R173A NSs binds to wt PKR. R173A NSs formed filamentous structure in nucleus in a mosaic pattern, which was distinct from MP-12 NSs filament pattern. Due to early phosphorylation of eIF2α, rMP12-NSsR173A could not efficiently accumulate viral proteins. Our results suggest that NSs-mediated host general transcription suppression occurs independently of PKR degradation, while the PKR degradation is important to inhibit the phosphorylation of eIF2α in infected cells undergoing host general transcription suppression.

Indexed as

AnimalsCell LineChlorocebus aethiopseIF-2 KinaseEukaryotic Initiation Factor-2FibroblastsHEK293 CellsHumansMiceMutationPhosphorylationRift Valley fever virusRNA, Double-StrandedVero CellsViral Nonstructural ProteinsViral ProteinseIF-2 KinaseEukaryotic Initiation Factor-2RNA, Double-StrandedViral Nonstructural ProteinsViral Proteins

Identifiers

PMID23063407
PMCPMC3534933
OpenAlexW2073253018

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.