Evidence map›Paper›PMID 23063122›Full record

ArticleCell2012

A structural basis for the assembly and functions of a viral polymer that inactivates multiple tumor suppressors.

Horng D Ou, Witek Kwiatkowski, Thomas J Deerinck, Andrew Noske, Katie Y Blain, Hannah S Land, Conrado Soria, Colin J Powers, Andrew P May, Xiaokun Shu and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 79 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. SMC-based immunity against extrachromosomal DNA elements.Biochemical Society transactions · 2023
    Article
  9. Review
  10. Article
  11. Article
  12. Viruses in the Nucleus.Cold Spring Harbor perspectives in biology · 2021
    Review
  13. Article
  14. Review
  15. Review
  16. Article
  17. Review
  18. Review
  19. Review
  20. Article

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 2 countries.

Horng D OuMolecular and Cell Biology Laboratory, Salk Institute for Biological Studies, 10010 North Torrey Pines Road, La Jolla, CA 92037, USA.
Witek Kwiatkowski
Thomas J Deerinck
Andrew Noske
Katie Y Blain
Hannah S Land
Conrado Soria
Colin J Powers
Andrew P May
Xiaokun Shu
Roger Y Tsien
James A J Fitzpatrick
Jeff A Long
Mark H Ellisman
Senyon Choe
Clodagh C O'Shea
Salk Institute for Biological Studies · USUniversity of California San Diego · USHoward Hughes Medical Institute · USFluidigm (United States) · US

Funding

Viral Vector Core (VVC)P30CA014195 · NCI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI Ye Zheng · 1985 to 2026
$82.8M
VOLUMETRIC CONTOUR-BASED SURFACE RECONSTRUCTIONP41RR004050 · NCRR · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PASQUALE, ELENA B · 1989 to 2011
$28.0M
IVEM and Image Analysis ResourceP41GM103412 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ELLISMAN, MARK H · 2012 to 2019
$17.9M
La Jolla Interdisciplinary Neuroscience Center Cores - Vital VP30NS057096 · NINDS · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI LIPTON, STUART A · 2006 to 2010
$12.7M
Salk Institute Cancer Training GrantT32CA009370 · NCI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI Diana Clare Hargreaves, Jan Karlseder · 1986 to 2026
$8.6M
New Probe and Methods for Correlated LM & EMR01GM086197 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ADAMS, STEPHEN ROY, BOASSA, DANIELA · 2008 to 2020
$8.3M
Defining Critical p53 Therapeutic Targets and MechanismsR01CA137094 · NCI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI O'SHEA, CLODAGH · 2009 to 2019
$4.1M
NCI NIH HHS CA137094NCI NIH HHS P30 CA014195NCI NIH HHS P30CA014195NCI NIH HHS R01 CA137094NCI NIH HHS T32 CA009370NCRR NIH HHS 5P41RR004050NCRR NIH HHS P41 RR004050NIGMS NIH HHS P41 GM103412NIGMS NIH HHS R01 GM086197NIGMS NIH HHS R01GM086197NINDS NIH HHS P30 NS057096NINDS NIH HHS P30NS057096
6 · The paper itself

Abstract

Evolution of minimal DNA tumor virus' genomes has selected for small viral oncoproteins that hijack critical cellular protein interaction networks. The structural basis for the multiple and dominant functions of adenovirus oncoproteins has remained elusive. E4-ORF3 forms a nuclear polymer and simultaneously inactivates p53, PML, TRIM24, and MRE11/RAD50/NBS1 (MRN) tumor suppressors. We identify oligomerization mutants and solve the crystal structure of E4-ORF3. E4-ORF3 forms a dimer with a central β core, and its structure is unrelated to known polymers or oncogenes. E4-ORF3 dimer units coassemble through reciprocal and nonreciprocal exchanges of their C-terminal tails. This results in linear and branched oligomer chains that further assemble in variable arrangements to form a polymer network that partitions the nuclear volume. E4-ORF3 assembly creates avidity-driven interactions with PML and an emergent MRN binding interface. This reveals an elegant structural solution whereby a small protein forms a multivalent matrix that traps disparate tumor suppressors.

Indexed as

Adenovirus E4 ProteinsAdenoviruses, HumanAdenovirus Infections, HumanCell LineCells, CulturedCrystallography, X-RayHumansNicotianaPlant CellsProtein FoldingTumor Suppressor ProteinsAdenovirus E4 ProteinsTumor Suppressor Proteins

Identifiers

PMID23063122
PMCPMC3681303
OpenAlexW2168893798

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.