Evidence map›Paper›PMID 23062752›Full record

ArticleSchizophrenia research2012

Transcriptomic analysis of postmortem brain identifies dysregulated splicing events in novel candidate genes for schizophrenia.

Ori S Cohen, Sarah Y Mccoy, Frank A Middleton, Sean Bialosuknia, Yanli Zhang-James, Lu Liu, Ming T Tsuang, Stephen V Faraone, Stephen J Glatt

Abstract read
In one paragraph

Article in Schizophrenia research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 35 citations in OpenAlex.

  1. A J-domain protein enhances memory by promoting physiological amyloid formation inProceedings of the National Academy of Sciences of the United States of America · 2026
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  15. Recent Advances in the Genetics of Schizophrenia.Molecular neuropsychiatry · 2018
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Ori S CohenPsychiatric Genetic Epidemiology & Neurobiology Laboratory (PsychGENe Lab), USA.
Sarah Y Mccoy
Frank A Middleton
Sean Bialosuknia
Yanli Zhang-James
Lu Liu
Ming T Tsuang
Stephen V Faraone
Stephen J Glatt
SUNY Upstate Medical University · USHarvard University · US

Funding

TARGETING GENETIC PATHWAYS FOR BRAIN OVERGROWTH IN AUTISM SPECTRUM DISORDERSP50MH081755 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI COURCHESNE, ERIC · 2007 to 2013
$10.3M
2/2-Expanding Rapid Ascertainment Networks Of Schizophrenia Families In TaiwanR01MH085521 · NIMH · UPSTATE MEDICAL UNIVERSITY · PI GLATT, STEPHEN J · 2008 to 2012
$1.5M
Schizophrenia Biomarkers: Blood vs Brain Gene ExpressionR21MH075027 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI TSUANG, MING T. · 2005 to 2006
$336k
NIMH NIH HHS P50 MH081755NIMH NIH HHS P50MH081755-0003NIMH NIH HHS R01 MH085521NIMH NIH HHS R01MH085521NIMH NIH HHS R21 MH075027NIMH NIH HHS R21MH075027
6 · The paper itself

Abstract

The diverse spatial and temporal expression of alternatively spliced transcript isoforms shapes neurodevelopment and plays a major role in neuronal adaptability. Although alternative splicing is extremely common in the brain, its role in mental illnesses such as schizophrenia has received little attention. To examine this relationship, postmortem brain tissue was obtained from 20 individuals with schizophrenia (SZ) and 20 neuropsychiatrically normal comparison subjects. Gray matter samples were extracted from two brain regions implicated in the disorder: Brodmann Area 10 and caudate. Affymetrix Human Gene 1.0 ST arrays were used on four subjects per group to attain an initial profile of differential expression of transcribed elements within and across brain regions in SZ. Numerous genes of interest with altered mRNA transcripts were identified by microarray through the differential expression of particular exons and 3' untranslated regions (UTRs) between diagnostic groups. Select microarray results--including dysregulation of ENAH exon 11a and CPNE3 3'UTR--were verified by qRTPCR and replicated in the remaining independent sample of 16 SZ patients and 16 normal comparison subjects. These results, if further replicated, clearly illustrate the importance of Identifying transcriptomic variants in expression studies, and implicate novel candidate genes in the disorder.

Indexed as

TranscriptomeAgedAged, 80 and overAlternative SplicingArabidopsis ProteinsBrainComputational BiologyExonsFemaleGene Expression ProfilingHumansIntramolecular TransferasesMaleMicrofilament ProteinsMiddle AgedOligonucleotide Array Sequence AnalysisArabidopsis Proteinscopine IIIEnah protein, humanIntramolecular Transferasesmarneral synthase, ArabidopsisMicrofilament ProteinsPhosphoproteins

Identifiers

PMID23062752
PMCPMC3502694
OpenAlexW1974092085

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.