Evidence map›Paper›PMID 23062308›Full record

ArticleDevelopment and psychopathology2012

Age-related changes of gene expression in the neocortex: preliminary data on RNA-Seq of the transcriptome in three functionally distinct cortical areas.

Oksana Yu Naumova, Dean Palejev, Natalia V Vlasova, Maria Lee, Sergei Yu Rychkov, Olga N Babich, Flora M Vaccarino, Elena L Grigorenko

Abstract read
In one paragraph

Article in Development and psychopathology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Endosomal Acid-Base Homeostasis in Neurodegenerative Diseases.Reviews of physiology, biochemistry and pharmacology · 2023
    Article
  6. Review
  7. Advances in transcriptome analysis of human brain aging.Experimental & molecular medicine · 2020
    Review
  8. Article
  9. Article
  10. Amyloid clearance defect in ApoE4 astrocytes is reversed by epigenetic correction of endosomal pH.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  11. Article
  12. Review
  13. Article
  14. The future of genomics for developmentalists.Development and psychopathology · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Oksana Yu NaumovaYale University, New Haven, CT 06519–1124, USA.
Dean Palejev
Natalia V Vlasova
Maria Lee
Sergei Yu Rychkov
Olga N Babich
Flora M Vaccarino
Elena L Grigorenko

Funding

THE FLORIDA LONGITUDINAL STUDYP50HD052120 · NICHD · FLORIDA STATE UNIVERSITY · PI Nicole Sandi Patton-Terry · 2006 to 2026
$31.7M
Genetic Bases of Developmental Language DisordersR01DC007665 · NIDCD · YALE UNIVERSITY · PI GRIGORENKO, ELENA L · 2006 to 2010
$3.0M
NICHD NIH HHS P50 HD052120NIDCD NIH HHS DC007665NIDCD NIH HHS R01 DC007665
6 · The paper itself

Abstract

The study of gene expression (i.e., the study of the transcriptome) in different cells and tissues allows us to understand the molecular mechanisms of their differentiation, development and functioning. In this article, we describe some studies of gene-expression profiling for the purposes of understanding developmental (age-related) changes in the brain using different technologies (e.g., DNA-Microarray) and the new and increasingly popular RNA-Seq. We focus on advancements in studies of gene expression in the human brain, which have provided data on the structure and age-related variability of the transcriptome in the brain. We present data on RNA-Seq of the transcriptome in three distinct areas of the neocortex from different ages: mature and elderly individuals. We report that most age-related transcriptional changes affect cellular signaling systems, and, as a result, the transmission of nerve impulses. In general, the results demonstrate the high potential of RNA-Seq for the study of distinctive features of gene expression among cortical areas and the changes in expression through normal and atypical development of the central nervous system.

Indexed as

AdultAgedAgingFemaleFrontal LobeGene Expression ProfilingGene Expression Regulation, DevelopmentalHumansNeocortexOligonucleotide Array Sequence AnalysisSequence Analysis, RNATemporal Lobe

Identifiers

PMID23062308
PMCPMC3539811

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.