Evidence map›Paper›PMID 23055267›Full record

ArticleAutism research : official journal of the International Society for Autism Research2012

The expanding role of MBD genes in autism: identification of a MECP2 duplication and novel alterations in MBD5, MBD6, and SETDB1.

Holly N Cukier, Joycelyn M Lee, Deqiong Ma, Juan I Young, Vera Mayo, Brittany L Butler, Sandhya S Ramsook, Joseph A Rantus, Alexander J Abrams, Patrice L Whitehead and 6 more

Open access · greenAbstract read
In one paragraph

Article in Autism research : official journal of the International Society for Autism Research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 91 citations in OpenAlex.

  1. Article
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  7. A Novel Genetic Variant inInternational journal of molecular sciences · 2023
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  11. Gene×environment interactions in autism spectrum disorders.Current topics in developmental biology · 2023
    Review
  12. Article
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  14. Article
  15. Proteins That Read DNA Methylation.Advances in experimental medicine and biology · 2022
    Article
  16. Review
  17. Review
  18. Temporarily Epigenetic Repression in Bergmann Glia Regulates the Migration of Granule Cells.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2021
    Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 1 country.

Holly N CukierJohn P. Hussman Institute for Human Genomics, University of Miami, Miller School of Medicine, Miami, FL 33136, USA.
Joycelyn M Lee
Deqiong Ma
Juan I Young
Vera Mayo
Brittany L Butler
Sandhya S Ramsook
Joseph A Rantus
Alexander J Abrams
Patrice L Whitehead
Harry H Wright
Ruth K Abramson
Jonathan L Haines
Michael L Cuccaro
Margaret A Pericak-Vance
John R Gilbert
University of Miami · USUniversity of South Carolina · USDr. John T. Macdonald Foundation · USVanderbilt University · US

Funding

USE OF DNA PROBE FOR CHOLINERGIC AND NON-CHOLINERGIC MG ANTIGENP01NS026630 · NINDS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI PERICAK-VANCE, MARGARET A. · 1989 to 2009
$12.6M
Molecular and Genetic Epidemiology of AutismR01MH080647 · NIMH · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI PERICAK-VANCE, MARGARET A. · 2007 to 2011
$5.9M
NIMH NIH HHS R01 MH080647NINDS NIH HHS P01 NS026630
6 · The paper itself

Abstract

The methyl-CpG-binding domain (MBD) gene family was first linked to autism over a decade ago when Rett syndrome, which falls under the umbrella of autism spectrum disorders (ASDs), was revealed to be predominantly caused by MECP2 mutations. Since that time, MECP2 alterations have been recognized in idiopathic ASD patients by us and others. Individuals with deletions across the MBD5 gene also present with ASDs, impaired speech, intellectual difficulties, repetitive behaviors, and epilepsy. These findings suggest that further investigations of the MBD gene family may reveal additional associations related to autism. We now describe the first study evaluating individuals with ASD for rare variants in four autosomal MBD family members, MBD5, MBD6, SETDB1, and SETDB2, and expand our initial screening in the MECP2 gene. Each gene was sequenced over all coding exons and evaluated for copy number variations in 287 patients with ASD and an equal number of ethnically matched control individuals. We identified 186 alterations through sequencing, approximately half of which were novel (96 variants, 51.6%). We identified 17 ASD specific, nonsynonymous variants, four of which were concordant in multiplex families: MBD5 Tyr1269Cys, MBD6 Arg883Trp, MECP2 Thr240Ser, and SETDB1 Pro1067del. Furthermore, a complex duplication spanning of the MECP2 gene was identified in two brothers who presented with developmental delay and intellectual disability. From our studies, we provide the first examples of autistic patients carrying potentially detrimental alterations in MBD6 and SETDB1, thereby demonstrating that the MBD gene family potentially plays a significant role in rare and private genetic causes of autism.

Indexed as

AdolescentAdultAutistic DisorderChildChild, PreschoolDNA-Binding ProteinsDNA Copy Number VariationsFemaleGene DuplicationGenetic Predisposition to DiseaseHistone-Lysine N-MethyltransferaseHumansMaleMethyl-CpG-Binding Protein 2Polymorphism, Single NucleotideProtein MethyltransferasesDNA-Binding ProteinsHistone-Lysine N-MethyltransferaseMBD5 protein, humanMBD6 protein, humanMethyl-CpG-Binding Protein 2Protein MethyltransferasesSETDB1 protein, human

Identifiers

PMID23055267
PMCPMC3528798
OpenAlexW1552016186

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.