Evidence map›Paper›PMID 23055184›Full record

ReviewEnvironmental and molecular mutagenesis2012

Modulation of mutagenesis in eukaryotes by DNA replication fork dynamics and quality of nucleotide pools.

Irina S-R Waisertreiger, Victoria G Liston, Miriam R Menezes, Hyun-Min Kim, Kirill S Lobachev, Elena I Stepchenkova, Tahir H Tahirov, Igor B Rogozin, Youri I Pavlov

Abstract readReview
In one paragraph

Review in Environmental and molecular mutagenesis, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Eukaryotic genome instability in light of asymmetric DNA replication.Critical reviews in biochemistry and molecular biology · 2016
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Irina S-R WaisertreigerEppley Institute for Research in Cancer and Allied Diseases, ESH 7009, 986805 Nebraska Medical Center, University of Nebraska, Omaha, NE, USA.
Victoria G Liston
Miriam R Menezes
Hyun-Min Kim
Kirill S Lobachev
Elena I Stepchenkova
Tahir H Tahirov
Igor B Rogozin
Youri I Pavlov

Funding

UNMC Structural Biology CoreP20GM103427 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI PAUL L SORGEN · 2012 to 2026
$59.2M
ZINC FINGER-INSPIRED FLUORESCENT CHEMOSENSORSP20RR016469 · NCRR · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI EUDY, JAMES D · 2001 to 2011
$36.2M
Structural Basis for Synergistic Gene Expression by Runx1 and Ets1 ProteinsR01GM082923 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI TAHIROV, TAHIR H · 2008 to 2012
$1.5M
Control of Genome Stability by Replicative DNA PolymerasesR01CA129925 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI PAVLOV, YOURI I · 2008 to 2012
$1.2M
NCI NIH HHS CA129925NCI NIH HHS R01 CA129925NCRR NIH HHS 5P20RR016469NCRR NIH HHS P20 RR016469NIGMS NIH HHS 8P20GM103427NIGMS NIH HHS P20 GM103427NIGMS NIH HHS R01GM0825950NIGMS NIH HHS R01 GM082923NIGMS NIH HHS R01GM082923PHS HHS 2011-27
6 · The paper itself

Abstract

The rate of mutations in eukaryotes depends on a plethora of factors and is not immediately derived from the fidelity of DNA polymerases (Pols). Replication of chromosomes containing the anti-parallel strands of duplex DNA occurs through the copying of leading and lagging strand templates by a trio of Pols α, δ and ϵ, with the assistance of Pol ζ and Y-family Pols at difficult DNA template structures or sites of DNA damage. The parameters of the synthesis at a given location are dictated by the quality and quantity of nucleotides in the pools, replication fork architecture, transcription status, regulation of Pol switches, and structure of chromatin. The result of these transactions is a subject of survey and editing by DNA repair.

Indexed as

DNA ReplicationMutagenesisAnimalsDNA-Directed DNA PolymeraseHumansNucleotidesDNA-Directed DNA PolymeraseNucleotides

Identifiers

PMID23055184
PMCPMC3893020

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.