Evidence map›Paper›PMID 23053198›Full record

ArticleFunctional & integrative genomics2012

Genome-wide identification of rice class I metallothionein gene: tissue expression patterns and induction in response to heavy metal stress.

Neelam Gautam, Pankaj Kumar Verma, Shikha Verma, Rudra Deo Tripathi, Prabodh Kumar Trivedi, Bijan Adhikari, Debasis Chakrabarty

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Article in Functional & integrative genomics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 82 citations in OpenAlex.

  1. Article
  2. Review
  3. International journal of molecular sciences · 2023
    Article
  4. Article
  5. Review
  6. Metallothionein1A Regulates Rhizobial Infection and Nodulation inInternational journal of molecular sciences · 2022
    Article
  7. Article
  8. Article
  9. Article
  10. Molecular insight of arsenic-induced carcinogenesis and its prevention.Naunyn-Schmiedeberg's archives of pharmacology · 2017
    Review
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Neelam GautamCSIR-National Botanical Research Institute, Rana Pratap Marg, UP, India.
Pankaj Kumar Verma
Shikha Verma
Rudra Deo Tripathi
Prabodh Kumar Trivedi
Bijan Adhikari
Debasis Chakrabarty
National Botanical Research Institute · INGovernment of West Bengal · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Metallothioneins (MTs) are members of a family of cysteine-rich low molecular weight polypeptides which play an important role in heavy metal detoxification and homeostasis of intracellular metal ions in plant. Though MT genes from some selected plants have been characterized with respect to their protein sequences, kinetic properties and tissue-specific localization, no detailed study has been carried out in rice. Here, we present genome-wide identification, structural and expression analyses of rice MT gene family. Our analysis suggests presence of 11 class I MT genes in rice genome (Release 7 of the MSU Rice Genome Annotation Project) which are differentially expressed during growth and development, in various tissues and during biotic and abiotic stresses. Our analyses suggest that class I MT proteins in rice differ in tissue localization as well as in heavy metal coordination chemistry. We also suggest that some MTs have a predominant role in detoxification of As (V) in arsenic-tolerant rice cultivars. Our analysis suggests that apart from transcriptional regulation, post-transcriptional alternative splicing in some members of this family takes place during growth and development, in various tissues and during biotic and abiotic stresses.

Indexed as

Genome, PlantAlternative SplicingAmino Acid SequenceArsenicGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantMetallothioneinMetals, HeavyMolecular Sequence DataOrgan SpecificityOryzaPlant ProteinsStress, PhysiologicalTranscription, GeneticArsenicMetallothioneinMetals, HeavyPlant Proteins

Identifiers

PMID23053198
OpenAlexW2082945985

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.