Evidence map›Paper›PMID 23051753›Full record

ArticleNature2012

MR1 presents microbial vitamin B metabolites to MAIT cells.

Lars Kjer-Nielsen, Onisha Patel, Alexandra J Corbett, Jérôme Le Nours, Bronwyn Meehan, Ligong Liu, Mugdha Bhati, Zhenjun Chen, Lyudmila Kostenko, Rangsima Reantragoon and 10 more

Registry-linked trialAbstract read
PubMed Publisher
In one paragraph

Article in Nature, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05598346 (Significance and Biological Importance of Mucosal Associated Invariant T Cells in Inflammatory Bowel Disease Patients), which is not on this map. Cited by 798 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
798citing papers in PubMed, 1 pooled it
26.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05598346 unknown statusnot on this mapstarted 2023, after this paper: background citation

Significance and Biological Importance of Mucosal Associated Invariant T Cells in Inflammatory Bowel Disease Patients

TypeobservationalSponsorAssiut UniversityRan2023 to 2024Enrolled70ConditionsInflammatory Bowel Diseases
3 · Its place in the literature

Who cites it

798 citing papers in PubMed, 1 synthesis or guideline pooled it, 1,307 citations in OpenAlex.

  1. Influence of Alcohol on the Intestinal Immune System.Alcohol research : current reviews · 2025
    Pooled it
  2. Review
  3. Gut archaea drive human MAIT cell responses.bioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. T Cell Thoughts.Immunological reviews · 2026
    Review
  6. Select intratumoral riboflavin-auxotrophicProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  7. Anaerobic riboflavin degradation by human gutJournal of bacteriology · 2026
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Avoidance of MAIT cells is an essential determinant ofProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. MAIT cell plasticity generates CD4Cellular & molecular immunology · 2026
    Article
  20. Article

738 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors at 4 institutions in 2 countries.

Lars Kjer-NielsenDepartment of Microbiology & Immunology, University of Melbourne, Parkville, Victoria 3010, Australia.
Onisha Patel
Alexandra J Corbett
Jérôme Le Nours
Bronwyn Meehan
Ligong Liu
Mugdha Bhati
Zhenjun Chen
Lyudmila Kostenko
Rangsima Reantragoon
Nicholas A Williamson
Anthony W Purcell
Nadine L Dudek
Malcolm J McConville
Richard A J O'Hair
George N Khairallah
Dale I Godfrey
David P Fairlie
Jamie Rossjohn
James McCluskey
University of Melbourne · AUMonash University · AUUniversity of Queensland · AUCardiff University · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Antigen-presenting molecules, encoded by the major histocompatibility complex (MHC) and CD1 family, bind peptide- and lipid-based antigens, respectively, for recognition by T cells. Mucosal-associated invariant T (MAIT) cells are an abundant population of innate-like T cells in humans that are activated by an antigen(s) bound to the MHC class I-like molecule MR1. Although the identity of MR1-restricted antigen(s) is unknown, it is present in numerous bacteria and yeast. Here we show that the structure and chemistry within the antigen-binding cleft of MR1 is distinct from the MHC and CD1 families. MR1 is ideally suited to bind ligands originating from vitamin metabolites. The structure of MR1 in complex with 6-formyl pterin, a folic acid (vitamin B9) metabolite, shows the pterin ring sequestered within MR1. Furthermore, we characterize related MR1-restricted vitamin derivatives, originating from the bacterial riboflavin (vitamin B2) biosynthetic pathway, which specifically and potently activate MAIT cells. Accordingly, we show that metabolites of vitamin B represent a class of antigen that are presented by MR1 for MAIT-cell immunosurveillance. As many vitamin biosynthetic pathways are unique to bacteria and yeast, our data suggest that MAIT cells use these metabolites to detect microbial infection.

Indexed as

Antigen PresentationBacterial Infectionsbeta 2-MicroglobulinBinding SitesCell LineCrystallography, X-RayFolic AcidHistocompatibility AntigensHistocompatibility Antigens Class IHumansImmunologic SurveillanceJurkat CellsLigandsLymphocyte ActivationMinor Histocompatibility AntigensModels, Molecularbeta 2-MicroglobulinFolic AcidHistocompatibility AntigensHistocompatibility Antigens Class ILigandsMinor Histocompatibility AntigensMR1 protein, humanPterins

Identifiers

PMID23051753
OpenAlexW2065252029

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.