Evidence map›Paper›PMID 23050232›Full record

ArticleG3 (Bethesda, Md.)2012

Global gene expression in Coprinopsis cinerea meiotic mutants reflects checkpoint arrest.

Erika Anderson, Claire Burns, Miriam E Zolan

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. The meiotic checkpoint network: step-by-step through meiotic prophase.Cold Spring Harbor perspectives in biology · 2014
    Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Erika AndersonBiology Department, Indiana University, Bloomington, Indiana 47405, USA.
Claire Burns
Miriam E Zolan

Funding

RADIATION REPAIR AND MEIOSIS IN COPRINUS CINEREUSR01GM043930 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI ZOLAN, MIRIAM E · 1995 to 2009
$2.7M
RADIATION REPAIR AND MEIOSIS IN COPRINUS CINEREUSR29GM043930 · NIGMS · INDIANA UNIVERSITY BLOOMINGTON · PI ZOLAN, MIRIAM E · 1990 to 1994
–
NIGMS NIH HHS GM43930NIGMS NIH HHS R01 GM043930
6 · The paper itself

Abstract

The basidiomycete Coprinopsis cinerea is well-suited to studies of meiosis because meiosis progresses synchronously in 10 million cells within each mushroom cap. Approximately 20% of C. cinerea genes exhibit changing expression during meiosis, but meiosis and mushroom development happen concurrently and therefore differentially expressed genes might not be directly involved in meiotic processes. By using microarrays, we examined global gene expression across a meiotic time course in two mutants in which meiosis arrests but mushrooms develop normally. Genes differentially expressed in the mutants compared with the wild type are likely to be involved in meiosis and sporulation as opposed to mushroom development. In rad50-1, which arrests in late prophase, RNA abundance for a group of early meiotic genes remains high, whereas the expression of a group of late meiotic genes is never induced. In contrast, in msh5-22 (which fails to undergo premeiotic DNA replication), both early and late meiotic genes are underexpressed relative to wild type at late meiotic time points as the cells die. Genes that are differentially expressed relative to wild type in both mutants are particularly strong candidates for playing roles in meiosis and sporulation.

Indexed as

Cell Cycle CheckpointsGene Expression Regulation, FungalMeiosisMutationCoprinusDNA-Binding ProteinsDNA ReplicationFungal ProteinsGene Expression ProfilingDNA-Binding ProteinsFungal Proteinscheckpoint arrestmeiotic S phasemicroarray analysisMRN complexmushroom development

Identifiers

PMID23050232
PMCPMC3464114

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.