Evidence map›Paper›PMID 23049891›Full record

ArticlePloS one2012

A versatile overexpression strategy in the pathogenic yeast Candida albicans: identification of regulators of morphogenesis and fitness.

Murielle Chauvel, Audrey Nesseir, Vitor Cabral, Sadri Znaidi, Sophie Goyard, Sophie Bachellier-Bassi, Arnaud Firon, Mélanie Legrand, Dorothée Diogo, Claire Naulleau and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 106 citations in OpenAlex.

  1. Review
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  10. Application of the Mutant Libraries forInternational journal of molecular sciences · 2022
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  18. Frontiers in microbiology · 2022
    Article
  19. SAGA Complex Subunits inFrontiers in cellular and infection microbiology · 2022
    Article
  20. Review

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Murielle ChauvelInstitut Pasteur, Unité Biologie et Pathogénicité Fongiques, Département Génomes et Génétique, Paris, France.
Audrey Nesseir
Vitor Cabral
Sadri Znaidi
Sophie Goyard
Sophie Bachellier-Bassi
Arnaud Firon
Mélanie Legrand
Dorothée Diogo
Claire Naulleau
Tristan Rossignol
Christophe d'Enfert
Institut Pasteur · FRUniversité Paris Cité · FR

Funding

Wellcome Trust
6 · The paper itself

Abstract

Candida albicans is the most frequently encountered human fungal pathogen, causing both superficial infections and life-threatening systemic diseases. Functional genomic studies performed in this organism have mainly used knock-out mutants and extensive collections of overexpression mutants are still lacking. Here, we report the development of a first generation C. albicans ORFeome, the improvement of overexpression systems and the construction of two new libraries of C. albicans strains overexpressing genes for components of signaling networks, in particular protein kinases, protein phosphatases and transcription factors. As a proof of concept, we screened these collections for genes whose overexpression impacts morphogenesis or growth rates in C. albicans. Our screens identified genes previously described for their role in these biological processes, demonstrating the functionality of our strategy, as well as genes that have not been previously associated to these processes. This article emphasizes the potential of systematic overexpression strategies to improve our knowledge of regulatory networks in C. albicans. The C. albicans plasmid and strain collections described here are available at the Fungal Genetics Stock Center. Their extension to a genome-wide scale will represent important resources for the C. albicans community.

Indexed as

Gene Expression Regulation, FungalCandida albicansDoxycyclineFungal ProteinsGene LibraryGenes, FungalGenome, FungalGreen Fluorescent ProteinsImage Processing, Computer-AssistedKineticsModels, GeneticOpen Reading FramesPolymerase Chain ReactionPromoter Regions, GeneticSignal TransductionTetracyclineDoxycyclineFungal ProteinsGreen Fluorescent ProteinsTetracycline

Identifiers

PMID23049891
PMCPMC3457969
OpenAlexW2025947534

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.