Evidence map›Paper›PMID 23049763›Full record

ArticlePloS one2012

High-throughput screening for novel inhibitors of Neisseria gonorrhoeae penicillin-binding protein 2.

Alena Fedarovich, Kevin A Djordjevic, Shauna M Swanson, Yuri K Peterson, Robert A Nicholas, Christopher Davies

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.6field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Identification ofAntibiotics (Basel, Switzerland) · 2022
    Article
  8. Discovery of Pyrrolidine-2,3-diones as Novel Inhibitors ofAntibiotics (Basel, Switzerland) · 2021
    Article
  9. Review
  10. On Column Binding a Real-Time Biosensor forMolecules (Basel, Switzerland) · 2020
    Article
  11. Article
  12. Future Prospects forAntibiotics (Basel, Switzerland) · 2018
    Review
  13. Review
  14. Multicomponent mixtures for cryoprotection and ligand solubilization.Biotechnology reports (Amsterdam, Netherlands) · 2015
    Article
  15. Resistance to antibiotics targeted to the bacterial cell wall.Protein science : a publication of the Protein Society · 2014
    Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Alena FedarovichDepartment of Biochemistry & Molecular Biology, Medical University of South Carolina, Charleston, South Carolina, USA. fedorove@musc.edu
Kevin A Djordjevic
Shauna M Swanson
Yuri K Peterson
Robert A Nicholas
Christopher Davies
Medical University of South Carolina · USUniversity of North Carolina at Chapel Hill · US

Funding

Supplement to Molecular Targets in Peptidoglycan SynthesisR01GM066861 · NIGMS · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI DAVIES, CHRISTOPHER · 2003 to 2019
$5.4M
PENICILLIN RESISTANT NEISSERIA GONORRHOEAE (CMRNG)R01AI036901 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI NICHOLAS, ROBERT A · 1996 to 2010
$3.5M
NIAID NIH HHS AI36901NIAID NIH HHS R01 AI036901NIGMS NIH HHS GM66861NIGMS NIH HHS R01 GM066861
6 · The paper itself

Abstract

The increasing prevalence of N. gonorrhoeae strains exhibiting decreased susceptibility to third-generation cephalosporins and the recent isolation of two distinct strains with high-level resistance to cefixime or ceftriaxone heralds the possible demise of β-lactam antibiotics as effective treatments for gonorrhea. To identify new compounds that inhibit penicillin-binding proteins (PBPs), which are proven targets for β-lactam antibiotics, we developed a high-throughput assay that uses fluorescence polarization (FP) to distinguish the fluorescent penicillin, Bocillin-FL, in free or PBP-bound form. This assay was used to screen a 50,000 compound library for potential inhibitors of N. gonorrhoeae PBP 2, and 32 compounds were identified that exhibited >50% inhibition of Bocillin-FL binding to PBP 2. These included a cephalosporin that provided validation of the assay. After elimination of compounds that failed to exhibit concentration-dependent inhibition, the antimicrobial activity of the remaining 24 was tested. Of these, 7 showed antimicrobial activity against susceptible and penicillin- or cephalosporin-resistant strains of N. gonorrhoeae. In molecular docking simulations using the crystal structure of PBP 2, two of these inhibitors docked into the active site of the enzyme and each mediate interactions with the active site serine nucleophile. This study demonstrates the validity of a FP-based assay to find novel inhibitors of PBPs and paves the way for more comprehensive high-throughput screening against highly resistant strains of N. gonorrhoeae. It also provides a set of lead compounds for optimization of anti-gonococcal agents.

Indexed as

High-Throughput Screening AssaysAnti-Bacterial AgentsBacterial Proteinsbeta-Lactam ResistanceBoron CompoundsCatalytic DomainCephalosporinsDose-Response Relationship, DrugFluorescence PolarizationMicrobial Sensitivity TestsMolecular Docking SimulationNeisseria gonorrhoeaePenicillin-Binding ProteinsPenicillinsProtein BindingRecombinant ProteinsAnti-Bacterial AgentsBacterial ProteinsBOCILLIN FLBoron CompoundsCephalosporinsPenicillin-Binding ProteinsPenicillinsRecombinant ProteinsSmall Molecule Libraries

Identifiers

PMID23049763
PMCPMC3458020
OpenAlexW1983769859

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.