Evidence map›Paper›PMID 23049480›Full record

ArticlePLoS biology2012

Bax activation initiates the assembly of a multimeric catalyst that facilitates Bax pore formation in mitochondrial outer membranes.

Yulia Kushnareva, Alexander Y Andreyev, Tomomi Kuwana, Donald D Newmeyer

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 94 citations in OpenAlex.

  1. Review
  2. [PINK1 suppresses colorectal cancer cell growth through epigenetic regulation of histone modifications].Zhejiang da xue xue bao. Yi xue ban = Journal of Zhejiang University. Medical sciences · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Yulia KushnarevaLa Jolla Institute for Allergy and Immunology, La Jolla, California, United States of America.
Alexander Y Andreyev
Tomomi Kuwana
Donald D Newmeyer
La Jolla Institute for Immunology · USUniversity of California, San Diego · US

Funding

MITOCHONDRIAL FUNCTION IN APOPTOSISR01GM062289 · NIGMS · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI NEWMEYER, DONALD DAVID · 2001 to 2013
$4.3M
Mitochondrial Pathways in ApoptosisR01GM050284 · NIGMS · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI NEWMEYER, DONALD DAVID · 1997 to 2009
$2.8M
Mitochrondrial Regulation of ApoptosisR01GM086389 · NIGMS · UNIVERSITY OF IOWA · PI KUWANA, TOMOMI · 2009 to 2013
$1.6M
Mitochondrial Injury in Methamphetamine-Induced NeurodegenerationR03DA021385 · NIDA · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI KUSHNAREVA, YULIA · 2008 to 2009
$189k
NIDA NIH HHS R03 DA021385NIDA NIH HHS R03DA021385NIGMS NIH HHS R01 GM050284NIGMS NIH HHS R01 GM062289NIGMS NIH HHS R01 GM086389NIGMS NIH HHS R01GM086389NIGMS NIH HHS R01GM50284NIGMS NIH HHS R01GM62289
6 · The paper itself

Abstract

Bax/Bak-mediated mitochondrial outer membrane permeabilization (MOMP) is essential for "intrinsic" apoptotic cell death. Published studies used synthetic liposomes to reveal an intrinsic pore-forming activity of Bax, but it is unclear how other mitochondrial outer membrane (MOM) proteins might facilitate this function. We carefully analyzed the kinetics of Bax-mediated pore formation in isolated MOMs, with some unexpected results. Native MOMs were more sensitive than liposomes to added Bax, and MOMs displayed a lag phase not observed with liposomes. Heat-labile MOM proteins were required for this enhanced response. A two-tiered mathematical model closely fit the kinetic data: first, Bax activation promotes the assembly of a multimeric complex, which then catalyzes the second reaction, Bax-dependent pore formation. Bax insertion occurred immediately upon Bax addition, prior to the end of the lag phase. Permeabilization kinetics were affected in a reciprocal manner by [cBid] and [Bax], confirming the "hit-and-run" hypothesis of cBid-induced direct Bax activation. Surprisingly, MOMP rate constants were linearly related to [Bax], implying that Bax acts non-cooperatively. Thus, the oligomeric catalyst is distinct from Bax. Moreover, contrary to common assumption, pore formation kinetics depend on Bax monomers, not oligomers. Catalyst formation exhibited a sharp transition in activation energy at ∼28°C, suggesting a role for membrane lipid packing. Furthermore, catalyst formation was strongly inhibited by chemical antagonists of the yeast mitochondrial fission protein, Dnm1. However, the mammalian ortholog, Drp1, was undetectable in mitochondrial outer membranes. Moreover, ATP and GTP were dispensable for MOMP. Thus, the data argue that oligomerization of a catalyst protein, distinct from Bax and Drp1, facilitates MOMP, possibly through a membrane-remodeling event.

Indexed as

BiocatalysisProtein MultimerizationAnimalsbcl-2-Associated X ProteinBH3 Interacting Domain Death Agonist ProteinDynamin IHumansKineticsLiposomesMaleMitochondria, LiverMitochondrial MembranesMitochondrial Membrane Transport ProteinsMitochondrial Permeability Transition PoreModels, BiologicalPermeability3-(2,4-dichloro-5-methoxyphenyl)-2-sulfanyl-4(3H)-quinazolinonebcl-2-Associated X ProteinBH3 Interacting Domain Death Agonist ProteinDynamin ILiposomesMitochondrial Membrane Transport ProteinsMitochondrial Permeability Transition PoreQuinazolinones

Identifiers

PMID23049480
PMCPMC3457932
OpenAlexW2072740835

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.