Evidence map›Paper›PMID 23047821›Full record

ArticleBlood2012

PRRC2A and BCL2L11 gene variants influence risk of non-Hodgkin lymphoma: results from the InterLymph consortium.

Alexandra Nieters, Lucia Conde, Susan L Slager, Angela Brooks-Wilson, Lindsay Morton, Danica R Skibola, Anne J Novak, Jacques Riby, Stephen M Ansell, Eran Halperin and 33 more

Open access · bronzeAbstract readMulticenter Study
In one paragraph

Article in Blood, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 3 pooled it
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 3 syntheses or guidelines pooled it, 39 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Interplay of RNA mBiomedicines · 2024
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  10. The Role of mInternational journal of molecular sciences · 2023
    Review
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  13. Review
  14. The Influence ofIndian journal of hematology & blood transfusion : an official journal of Indian Society of Hematology and Blood Transfusion · 2021
    Article
  15. Article
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  18. Article
  19. MiR-106a promotes tumor growth, migration, and invasion by targetingAmerican journal of translational research · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

43 authors at 20 institutions in 9 countries.

Alexandra NietersCentre of Chronic Immunodeficiency, University Medical Center Freiburg,Engesser Strasse4, Freiburg, Germany. alexandra.nieters@uniklinikfreiburg
Lucia Conde
Susan L Slager
Angela Brooks-Wilson
Lindsay Morton
Danica R Skibola
Anne J Novak
Jacques Riby
Stephen M Ansell
Eran Halperin
Tait D Shanafelt
Luz Agana
Alice H Wang
Anneclaire J De Roos
Richard K Severson
Wendy Cozen
John Spinelli
Katja Butterbach
Nikolaus Becker
Silvia de Sanjose
Yolanda Benavente
Pierluigi Cocco
Anthony Staines
Marc Maynadié
Lenka Foretova
Paolo Boffetta
Paul Brennan
Qing Lan
Yawei Zhang
Tongzhang Zheng
Mark Purdue
Bruce Armstrong
Anne Kricker
Claire M Vajdic
Andrew Grulich
Martyn T Smith
Paige M Bracci
Stephen J Chanock
Patricia Hartge
James R Cerhan
Sophia S Wang
Nathaniel Rothman
Christine F Skibola
Mayo Clinic · USBerkeley Public Health Division · USNational Cancer Institute · USUniversity of California, Berkeley · USYale University · USCancer Research Center · USNational Institutes of Health · USUniversity of Sydney · AUCentre International de Recherche sur le Cancer · FRCentro de Investigación Biomédica en Red de Epidemiología y Salud Pública · ESCity of Hope · USDublin City University · IEFred Hutch Cancer Center · USGerman Cancer Research Center · DEHeidelberg University · DEIcahn School of Medicine at Mount Sinai · USInstitut d'Investigació Biomédica de Bellvitge · ESMaison des Sciences de l’Homme de Dijon · FRNational Centre for Clinical Research on Emerging Drugs · AUTel Aviv University · IL

Funding

Training CoreP42ES004705 · NIEHS · UNIVERSITY OF CALIFORNIA BERKELEY · PI MORELLO-FROSCH, RACHEL ADELE · 1987 to 2025
$74.6M
Multidisciplinary Studies of LymphomaZIACP010170 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI MORTON, LINDSAY · 2009 to 2025
$10.7M
Molecular Epidemiology of NHL and CLLR01CA092153 · NCI · MAYO CLINIC ROCHESTER · PI CERHAN, JAMES R · 2003 to 2012
$6.7M
A Genome-Wide Association Study of Non-Hodgkin LymphomaR01CA122663 · NCI · UNIVERSITY OF CALIFORNIA BERKELEY · PI SKIBOLA, CHRISTINE F. · 2006 to 2010
$2.7M
Genetic Susceptibility to Non-Hodgkins LymphomaR01CA104682 · NCI · UNIVERSITY OF CALIFORNIA BERKELEY · PI SKIBOLA, CHRISTINE F. · 2003 to 2012
$2.6M
Resequencing and Functional Studies to Identify Causal Gene Variants of LymphomaR01CA154643 · NCI · UNIVERSITY OF CALIFORNIA BERKELEY · PI ZHANG, JIANQING · 2011 to 2014
$2.4M
EPIDEMIOLOGY OF NON HODGKINS'S LYMPHOMA DATA ANALYSISR03CA089745 · NCI · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI HOLLY, ELIZABETH A. · 2001 to 2002
$148k
HAIR DYE USE AND RISK OF NONHODGKINS LYMPHOMAR01CA062006 · NCI · YALE UNIVERSITY · PI ZHENG, TONGZHANG · 1995 to 2000
$125k
EPIDEMIOLOGY OF NON-HODGKIN'S LYMPHOMA &RETROVIRAL TESTR01CA045614 · NCI · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI HOLLY, ELIZABETH A. · 1988 to 1992
–
CIHRIntramural NIH HHSNCI NIH HHS CA104682NCI NIH HHS CA122663NCI NIH HHS CA154643-01A1NCI NIH HHS CA89745NCI NIH HHS CA92153NCI NIH HHS N01 CO012400NCI NIH HHS R01 CA045614NCI NIH HHS R01 CA062006NCI NIH HHS R01 CA092153NCI NIH HHS R01 CA104682NCI NIH HHS R01 CA122663NCI NIH HHS R01 CA154643NCI NIH HHS R03 CA089745NIEHS NIH HHS P42 ES004705
6 · The paper itself

Abstract

Many common genetic variants have been associated with non-Hodgkin lymphoma (NHL), but individual study results are often conflicting. To confirm the role of putative risk alleles in B-cell NHL etiology, we performed a validation genotyping study of 67 candidate single nucleotide polymorphisms within InterLymph, a large international consortium of NHL case-control studies. A meta-analysis was performed on data from 5633 B-cell NHL cases and 7034 controls from 8 InterLymph studies. rs3789068 in the proapoptotic BCL2L11 gene was associated with an increased risk for B-cell NHL (odds ratio = 1.21, P random = 2.21 × 10(-11)), with similar risk estimates for common B-cell subtypes. PRRC2A rs3132453 in the HLA complex class III region conferred a reduced risk of B-cell NHL (odds ratio = 0.68, P random = 1.07 × 10(-9)) and was likewise evident for common B-cell subtypes. These results are consistent with the known biology of NHL and provide insights into shared pathogenic components, including apoptosis and immune regulation, for the major B-cell lymphoma subtypes.

Indexed as

Polymorphism, Single NucleotideApoptosis Regulatory ProteinsBcl-2-Like Protein 11Case-Control StudiesFemaleGene FrequencyGenetic Predisposition to DiseaseGenotypeHumansLymphoma, Non-HodgkinMaleMembrane ProteinsMeta-Analysis as TopicOdds RatioProteinsProto-Oncogene ProteinsApoptosis Regulatory ProteinsBCL2L11 protein, humanBcl-2-Like Protein 11Membrane ProteinsProteinsProto-Oncogene ProteinsPRRC2A protein, human

Identifiers

PMID23047821
PMCPMC3512239
OpenAlexW2070285748

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.