Evidence map›Paper›PMID 23047597›Full record

ArticleNucleus (Austin, Tex.)

The new nucleoporin: regulator of transcriptional repression and beyond.

Nayan J Sarma, Kristine Willis

Open access · goldAbstract read
In one paragraph

Article in Nucleus (Austin, Tex.). The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Nayan J SarmaDepartment of Surgery, Washington University School of Medicine, St. Louis, MO, USA.
Kristine Willis
Georgetown University · USWashington University in St. Louis · US

Funding

Movement of regulated genes to the nuclear peripheryR15GM083309 · NIGMS · UNIVERSITY OF SOUTHERN MISSISSIPPI · PI WILLIS, KRISTINE AMALEE · 2008 to 2011
$633k
NIGMS NIH HHS GM083309NIGMS NIH HHS R15 GM083309
6 · The paper itself

Abstract

Transcriptional regulation is a complex process that requires the integrated action of many multi-protein complexes. The way in which a living cell coordinates the action of these complexes in time and space is still poorly understood. Recent work has shown that nuclear pores, well known for their role in 3' processing and export of transcripts, also participate in the control of transcriptional initiation. We have recently begun to explore how nuclear pores interface with the well-described machinery that regulates initiation. This work led to the discovery that specific nucleoporins are required for binding of the repressor protein Mig1 to its site in target promoters. Nuclear pores are therefore involved in repressing, as well as activating, transcription. Here we discuss in detail the main models explaining our result and consider what each implies about the roles that nuclear pores play in the regulation of gene expression.

Indexed as

beta-FructofuranosidaseGene Expression Regulation, FungalHistonesHomeodomain ProteinsHumansModels, MolecularNuclear PoreNuclear Pore Complex ProteinsPromoter Regions, GeneticRepressor ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae Proteinsbeta-FructofuranosidaseHistoneshomeobox protein HOXA9Homeodomain ProteinsMIG1 protein, S cerevisiaenuclear pore complex protein 98Nuclear Pore Complex ProteinsNUP120 protein, S cerevisiaeNUP133 protein, S cerevisiaeRepressor ProteinsSaccharomyces cerevisiae ProteinsSUC2 protein, S cerevisiae

Identifiers

PMID23047597
PMCPMC3515533
OpenAlexW2016870331

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.