Evidence map›Paper›PMID 23046713›Full record

ArticleBMC plant biology2012

Two putative-aquaporin genes are differentially expressed during arbuscular mycorrhizal symbiosis in Lotus japonicus.

Marco Giovannetti, Raffaella Balestrini, Veronica Volpe, Mike Guether, Daniel Straub, Alex Costa, Uwe Ludewig, Paola Bonfante

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 73 citations in OpenAlex.

  1. Review
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  5. Increasing yield on dry fields: molecular pathways with growing potential.The Plant journal : for cell and molecular biology · 2022
    Review
  6. Whole-genome resequencing identifies quantitative trait loci associated with mycorrhizal colonization of soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Article
  7. Review
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  10. Investigation of theInternational journal of molecular sciences · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Marco GiovannettiDepartment of Life Sciences and Systems Biology, University of Torino and IPP-CNR, Torino, Italy.
Raffaella Balestrini
Veronica Volpe
Mike Guether
Daniel Straub
Alex Costa
Uwe Ludewig
Paola Bonfante
University of Turin · ITUniversity of Hohenheim · DEKarlsruhe Institute of Technology · DEUniversity of Milan · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundArbuscular mycorrhizas (AM) are widespread symbioses that provide great advantages to the plant, improving its nutritional status and allowing the fungus to complete its life cycle. Nevertheless, molecular mechanisms that lead to the development of AM symbiosis are not yet fully deciphered. Here, we have focused on two putative aquaporin genes, LjNIP1 and LjXIP1, which resulted to be upregulated in a transcriptomic analysis performed on mycorrhizal roots of Lotus japonicus.

resultsA phylogenetic analysis has shown that the two putative aquaporins belong to different functional families: NIPs and XIPs. Transcriptomic experiments have shown the independence of their expression from their nutritional status but also a close correlation with mycorrhizal and rhizobial interaction. Further transcript quantification has revealed a good correlation between the expression of one of them, LjNIP1, and LjPT4, the phosphate transporter which is considered a marker gene for mycorrhizal functionality. By using laser microdissection, we have demonstrated that one of the two genes, LjNIP1, is expressed exclusively in arbuscule-containing cells. LjNIP1, in agreement with its putative role as an aquaporin, is capable of transferring water when expressed in yeast protoplasts. Confocal analysis have demonstrated that eGFP-LjNIP1, under its endogenous promoter, accumulates in the inner membrane system of arbusculated cells.

conclusionsOverall, the results have shown different functionality and expression specificity of two mycorrhiza-inducible aquaporins in L. japonicus. One of them, LjNIP1 can be considered a novel molecular marker of mycorrhizal status at different developmental stages of the arbuscule. At the same time, LjXIP1 results to be the first XIP family aquaporin to be transcriptionally regulated during symbiosis.

Indexed as

Gene Expression ProfilingGene Expression Regulation, PlantAquaporinsBiological TransportColony Count, MicrobialEndoplasmic ReticulumGenes, PlantGenetic Complementation TestLotusModels, BiologicalMutationMycorrhizaeNicotianaOrgan SpecificityPhylogenyPlant EpidermisAquaporinsPlant ProteinsQuaternary Ammonium CompoundsUreaWater

Identifiers

PMID23046713
PMCPMC3533510
OpenAlexW2100791562

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.