Evidence map›Paper›PMID 23046558›Full record

ArticleSkeletal muscle2012

A role for RNA post-transcriptional regulation in satellite cell activation.

Nicholas H Farina, Melissa Hausburg, Nicole Dalla Betta, Crystal Pulliam, Deepak Srivastava, Ddw Cornelison, Bradley B Olwin

Open access · goldAbstract read
In one paragraph

Article in Skeletal muscle, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Epitranscriptome Mapping of NMethods in molecular biology (Clifton, N.J.) · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Nicholas H FarinaDepartment of Molecular, Cellular, and Developmental Biology, University of Colorado, Boulder, CO, 80309, USA. cornelisond@missouri.edu.
Melissa Hausburg
Nicole Dalla Betta
Crystal Pulliam
Deepak Srivastava
Ddw Cornelison
Bradley B Olwin
University of Colorado Boulder · USGladstone Institutes · USTriangle · USUniversity of Missouri · US

Funding

The Role of Syndecans in Satellite Cell FunctionR01AR049446 · NIAMS · UNIVERSITY OF COLORADO AT BOULDER · PI Bradley B Olwin · 2005 to 2026
$7.2M
TRAINING IN SIGNAL TRANSDUCTION &CELL CYCLE REGULATIONT32GM008759 · NIGMS · UNIVERSITY OF COLORADO AT BOULDER · PI AHN, NATALIE G. · 2000 to 2020
$5.9M
Predoctoral Training Program in Signaling and Cellular Regulation INCLUDE Down Syndrome SupplementT32GM142607 · NIGMS · UNIVERSITY OF COLORADO · PI Sabrina Leigh Spencer, Tin Tin Su · 2021 to 2026
$3.6M
MYOGENIC GRWOTH AND DIFFERENTIATIONR01AR039467 · NIAMS · UNIVERSITY OF COLORADO AT BOULDER · PI OLWIN, BRADLEY B · 1994 to 2008
$2.8M
Age-Dependent Regulation of Muscle Stem Cell HomeostasisR01AG040074 · NIA · UNIVERSITY OF COLORADO · PI OLWIN, BRADLEY B · 2011 to 2015
$1.7M
NIAMS NIH HHS R01 AR039467NIAMS NIH HHS R01 AR049446NIA NIH HHS R01 AG040074NIGMS NIH HHS T32 GM008759NIGMS NIH HHS T32 GM142607
6 · The paper itself

Abstract

unlabelled

backgroundSatellite cells are resident skeletal muscle stem cells responsible for muscle maintenance and repair. In resting muscle, satellite cells are maintained in a quiescent state. Satellite cell activation induces the myogenic commitment factor, MyoD, and cell cycle entry to facilitate transition to a population of proliferating myoblasts that eventually exit the cycle and regenerate muscle tissue. The molecular mechanism involved in the transition of a quiescent satellite cell to a transit-amplifying myoblast is poorly understood.

methodsSatellite cells isolated by FACS from uninjured skeletal muscle and 12 h post-muscle injury from wild type and Syndecan-4 null mice were probed using Affymetrix 430v2 gene chips and analyzed by Spotfiretm and Ingenuity Pathway analysis to identify gene expression changes and networks associated with satellite cell activation, respectively. Additional analyses of target genes identify miRNAs exhibiting dynamic changes in expression during satellite cell activation. The function of the miRNAs was assessed using miRIDIAN hairpin inhibitors.

resultsAn unbiased gene expression screen identified over 4,000 genes differentially expressed in satellite cells in vivo within 12 h following muscle damage and more than 50% of these decrease dramatically. RNA binding proteins and genes involved in post-transcriptional regulation were significantly over-represented whereas splicing factors were preferentially downregulated and mRNA stability genes preferentially upregulated. Furthermore, six computationally identified miRNAs demonstrated novel expression through muscle regeneration and in satellite cells. Three of the six miRNAs were found to regulate satellite cell fate.

conclusionsThe quiescent satellite cell is actively maintained in a state poised to activate in response to external signals. Satellite cell activation appears to be regulated by post-transcriptional gene regulation.

Identifiers

PMID23046558
PMCPMC3563611
OpenAlexW2149544198

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.