Evidence map›Paper›PMID 23045488›Full record

ArticleJournal of bacteriology2012

Genome sequence and comparative pathogenomics analysis of a Salmonella enterica Serovar Typhi strain associated with a typhoid carrier in Malaysia.

Kien-Pong Yap, Han Ming Gan, Cindy Shuan Ju Teh, Ramani Baddam, Lay-Ching Chai, Narender Kumar, Suma Avasthi Tiruvayipati, Niyaz Ahmed, Kwai-Lin Thong

Abstract readComparative Study
In one paragraph

Article in Journal of bacteriology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Two draft genome sequences ofStandards in genomic sciences · 2016
    Article
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  7. Article
  8. Article
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  12. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Kien-Pong YapInstitute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia.
Han Ming Gan
Cindy Shuan Ju Teh
Ramani Baddam
Lay-Ching Chai
Narender Kumar
Suma Avasthi Tiruvayipati
Niyaz Ahmed
Kwai-Lin Thong

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Salmonella enterica serovar Typhi is a human pathogen that causes typhoid fever predominantly in developing countries. In this article, we describe the whole genome sequence of the S. Typhi strain CR0044 isolated from a typhoid fever carrier in Kelantan, Malaysia. These data will further enhance the understanding of its host persistence and adaptive mechanism.

Indexed as

Genome, BacterialSequence Analysis, DNACarrier StateDNA, BacterialGenomicsHumansMalaysiaMolecular Sequence DataSalmonella typhiTyphoid FeverVirulence FactorsDNA, BacterialVirulence Factors

Identifiers

PMID23045488
PMCPMC3486090

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.