Evidence map›Paper›PMID 23042526›Full record

ArticleCurrent protocols in cytometry2012

Quantitative fluorescent speckle microscopy (QFSM) to measure actin dynamics.

Michelle C Mendoza, Sebastien Besson, Gaudenz Danuser

Open access · greenAbstract read
In one paragraph

Article in Current protocols in cytometry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.1field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
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  8. Live Imaging of Cytoskeletal Dynamics in EmbryonicCold Spring Harbor protocols · 2021
    Article
  9. Actin flow-dependent and -independent force transmission through integrins.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  10. Article
  11. Article
  12. TheBiology open · 2019
    Article
  13. Article
  14. Article
  15. Vimentin fibers orient traction stress.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  16. Review
  17. Inducible fluorescent speckle microscopy.The Journal of cell biology · 2016
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Michelle C MendozaDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA.
Sebastien Besson
Gaudenz Danuser
Harvard University · US

Funding

Quantitative Fluorescent Speckle MicroscopyU01GM067230 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI DANUSER, GAUDENZ · 2008 to 2011
$1.7M
NIGMS NIH HHS U01 GM067230
6 · The paper itself

Abstract

Quantitative fluorescent speckle microscopy (QFSM) is a live-cell imaging method to analyze the dynamics of macromolecular assemblies with high spatial and temporal resolution. Its greatest successes were in the analysis of actin filament and adhesion dynamics in the context of cell migration and microtubule dynamics in interphase and the meiotic/mitotic spindle. Here, focus is on the former application to illustrate the procedures of FSM imaging and the computational image processing that extracts quantitative information from these experiments. QFSM is advantageous over other methods because it measures the movement and turnover kinetics of the actin filament (F-actin) network in living cells across the entire field of view. Experiments begin with the microinjection of fluorophore-labeled actin into cells, which generate a low ratio of fluorescently labeled to endogenously unlabeled actin monomers. Spinning disk confocal or wide-field imaging then visualizes fluorophore clusters (two to eight actin monomers) within the assembled F-actin network as speckles. QFSM software identifies and computationally tracks and utilizes the location, appearance, and disappearance of speckles to derive network flows and maps of the rate of filament assembly and disassembly.

Indexed as

Actin CytoskeletonActinsAnimalsCytoskeletonEpithelial CellsFluorescent DyesImage Processing, Computer-AssistedKidneyMicroscopy, FluorescenceMicrotubulesPotoroidaeSoftwareTemperatureTime FactorsActinsFluorescent Dyes

Identifiers

PMID23042526
PMCPMC3688286
OpenAlexW1922332119

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.