Evidence map›Paper›PMID 23042244›Full record

ArticleNucleic acids research2012

Mechanism of allele-selective inhibition of huntingtin expression by duplex RNAs that target CAG repeats: function through the RNAi pathway.

Jiaxin Hu, Jing Liu, Dongbo Yu, Yongjun Chu, David R Corey

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 36 citations in OpenAlex.

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  13. New developments in RAN translation: insights from multiple diseases.Current opinion in genetics & development · 2017
    Review
  14. Article
  15. Article
  16. Review
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  20. In vivo evaluation of candidate allele-specific mutant huntingtin gene silencing antisense oligonucleotides.Molecular therapy : the journal of the American Society of Gene Therapy · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Jiaxin HuDepartments of Pharmacology and Biochemistry, UT Southwestern Medical Center at Dallas, Dallas, TX 75390-9041, USA.
Jing Liu
Dongbo Yu
Yongjun Chu
David R Corey
Southwestern Medical Center · USSouthwestern Medical Center

Funding

Recognition of Chromosomal DNA by Peptide Nucleic AcidsR01GM073042 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI COREY, DAVID R · 2005 to 2016
$3.5M
NIGMS NIH HHS R01 GM073042PHS HHS 73042
6 · The paper itself

Abstract

Huntington's disease is an incurable neurodegenerative disorder caused by expansion of a CAG trinucleotide repeat within one allele of the huntingtin (HTT) gene. Agents that block expression of mutant HTT and preserve expression of wild-type HTT target the cause of the disease and are an alternative for therapy. We have previously demonstrated that mismatch-containing duplex RNAs complementary to the expanded trinucleotide repeat are potent and allele-selective inhibitors of mutant HTT expression, but the mechanism of allele selectivity was not explored. We now report that anti-CAG duplex RNA preferentially recruits argonaute 2 (AGO2) to mutant rather than wild-type HTT mRNA. Efficient inhibition of mutant HTT protein expression requires less AGO2 than needed for inhibiting wild-type expression. In contrast, inhibiting the expression of mutant HTT protein is highly sensitive to reduced expression of GW182 (TNRC6A) and its two paralogs, a protein family associated with miRNA action. Allele-selective inhibition may involve cooperative binding of multiple protein-RNA complexes to the expanded repeat. These data suggest that allele-selective inhibition proceeds through an RNA interference pathway similar to that used by miRNAs and that discrimination between mutant and wild-type alleles of HTT mRNA is highly sensitive to the pool of AGO2 and GW182 family proteins inside cells.

Indexed as

AllelesRNA, Double-StrandedRNA InterferenceTrinucleotide RepeatsAnimalsArgonaute ProteinsBase Pair MismatchCell LineCells, CulturedHuntingtin ProteinMutationNerve Tissue ProteinsRNA-Binding ProteinsRNA CleavageRNA, MessengerAGO2 protein, humanArgonaute ProteinsHTT protein, humanHuntingtin ProteinNerve Tissue ProteinsRNA-Binding ProteinsRNA, Double-StrandedRNA, Messenger

Identifiers

PMID23042244
PMCPMC3526262
OpenAlexW2153931198

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.