Evidence map›Paper›PMID 23039883›Full record

ArticleClinical and experimental immunology2012

Innate and adaptive immune gene expression profiles as biomarkers in human type 1 diabetes.

D Han, X Cai, J Wen, D Matheson, J S Skyler, N S Kenyon, Z Chen

Open access · greenAbstract read
In one paragraph

Article in Clinical and experimental immunology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 15 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Unlocking the biology of RAGE in diabetic microvascular complications.Trends in endocrinology and metabolism: TEM · 2014
    Review
  9. Review
  10. Progress in immune-based therapies for type 1 diabetes.Clinical and experimental immunology · 2013
    Review
  11. Article
  12. Article
  13. Novel biomarkers in type 1 diabetes.The review of diabetic studies : RDS · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

D HanDepartment of Microbiology and Immunology, RMSB 3035, University of Miami Miller School of Medicine, 1600 NW 10th Avenue, Miami, FL 33136, USA.
X Cai
J Wen
D Matheson
J S Skyler
N S Kenyon
Z Chen
Diabetes Australia · AUUniversity of Miami · US

Funding

Type 1 Diabetes TrialNet Clinical Center: Effects of Alefacept in New Onset T1DU01DK085499 · NIDDK · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI BAIDAL, DAVID · 2009 to 2018
$4.9M
The quantitative biology of CTLA4 splice variants in T1DDP3DK085696 · NIDDK · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI CHEN, ZHIBIN · 2009 to 2009
$2.3M
NIDDK NIH HHS DP3 DK085696NIDDK NIH HHS DP3DK085696NIDDK NIH HHS U01 DK085499NLM NIH HHS HHSN267200800019C
6 · The paper itself

Abstract

The mRNA levels of a set of immune-related genes were analysed with peripheral blood samples from at-risk, new-onset and long-term type 1 diabetes (T1D) patients, in comparison to those from healthy controls. The selected set includes T lymphocyte genes [CD3G and cytotoxic T lymphocyte-associated antigen 4 (CTLA4)], B lymphocyte genes (CD19 and CD20) and myeloid cell-related genes [CD11b, Toll-like receptor (TLR)-9, arginase (ARG1)]. Also included is a subset of the S100 family members that has been documented recently as regulatory elements of innate immunity. Samples from patients with long-term T1D had a reduced level of mRNA for most of selected innate and adaptive immune genes. No such reduction was detected in samples collected from at-risk or new-onset T1D patients. Analyses of regulatory gene expression ratios revealed a dynamic disproportion of CTLA4 versus CD3G expression in samples from at-risk, new-onset and long-term T1D patients. These changes could serve as immunological biomarkers for the status of the immune system during T1D progression and therapeutic interventions.

Indexed as

Adaptive ImmunityAdolescentAdultAntigens, CDArginaseBiomarkersCTLA-4 AntigenDiabetes Mellitus, Type 1FemaleGene Expression ProfilingGene Expression RegulationHumansImmunity, InnateMaleMiddle AgedRNA, MessengerAntigens, CDArginaseBiomarkersCTLA-4 AntigenCTLA4 protein, humanRNA, MessengerS100 ProteinsTLR9 protein, humanToll-Like Receptor 9

Identifiers

PMID23039883
PMCPMC3482359
OpenAlexW1535230565

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.