Evidence map›Paper›PMID 23035235›Full record

ArticleJournal of virology2012

Noncoding flavivirus RNA displays RNA interference suppressor activity in insect and Mammalian cells.

Esther Schnettler, Mark G Sterken, Jason Y Leung, Stefan W Metz, Corinne Geertsema, Rob W Goldbach, Just M Vlak, Alain Kohl, Alexander A Khromykh, Gorben P Pijlman

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 199 papers.

0numbers the graph read from it
0cells of the map it votes in
199citing papers in PubMed
23.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

199 citing papers in PubMed, 286 citations in OpenAlex.

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  13. Cellular Biology: Virus-Host Interactions and RNA Structure and Function.Current topics in microbiology and immunology · 2026
    Review
  14. Review
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  16. International journal of molecular sciences · 2025
    Review
  17. Review
  18. Article
  19. Identifying the interactions conferring functional mechanical rigidity on RNase-resistant RNA from Zika virus.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  20. Article

139 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Esther SchnettlerLaboratory of Virology, Wageningen University, Wageningen, Netherlands.
Mark G Sterken
Jason Y Leung
Stefan W Metz
Corinne Geertsema
Rob W Goldbach
Just M Vlak
Alain Kohl
Alexander A Khromykh
Gorben P Pijlman
Wageningen University & Research · NLMRC University of Glasgow Centre for Virus Research · GBUniversity of Queensland · AU

Funding

Medical Research Council MC_UP_A550_1031Medical Research Council MC_UU_12014/8
6 · The paper itself

Abstract

West Nile virus (WNV) and dengue virus (DENV) are highly pathogenic, mosquito-borne flaviviruses (family Flaviviridae) that cause severe disease and death in humans. WNV and DENV actively replicate in mosquitoes and human hosts and thus encounter different host immune responses. RNA interference (RNAi) is the predominant antiviral response against invading RNA viruses in insects and plants. As a countermeasure, plant and insect RNA viruses encode RNA silencing suppressor (RSS) proteins to block the generation/activity of small interfering RNA (siRNA). Enhanced flavivirus replication in mosquitoes depleted for RNAi factors suggests an important biological role for RNAi in restricting virus replication, but it has remained unclear whether or not flaviviruses counteract RNAi via expression of an RSS. First, we established that flaviviral RNA replication suppressed siRNA-induced gene silencing in WNV and DENV replicon-expressing cells. Next, we showed that none of the WNV encoded proteins displayed RSS activity in mammalian and insect cells and in plants by using robust RNAi suppressor assays. In contrast, we found that the 3'-untranslated region-derived RNA molecule known as subgenomic flavivirus RNA (sfRNA) efficiently suppressed siRNA- and miRNA-induced RNAi pathways in both mammalian and insect cells. We also showed that WNV sfRNA inhibits in vitro cleavage of double-stranded RNA by Dicer. The results of the present study suggest a novel role for sfRNA, i.e., as a nucleic acid-based regulator of RNAi pathways, a strategy that may be conserved among flaviviruses.

Indexed as

RNA InterferenceAedesAnimalsBase SequenceCell LineChlorocebus aethiopsCricetinaeDNA PrimersDrosophila melanogasterFlaviviridaePolymerase Chain ReactionRNA, UntranslatedRNA, ViralDNA PrimersRNA, UntranslatedRNA, Viral

Identifiers

PMID23035235
PMCPMC3503047
OpenAlexW2101221024

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.