Evidence map›Paper›PMID 23035102›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2012

Biasing amacrine subtypes in the Atoh7 lineage through expression of Barhl2.

Patricia R Jusuf, Shahad Albadri, Alessio Paolini, Peter D Currie, Francesco Argenton, Shin-ichi Higashijima, William A Harris, Lucia Poggi

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 44 citations in OpenAlex.

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  7. Genetic control of retinal ganglion cell genesis.Cellular and molecular life sciences : CMLS · 2021
    Review
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  12. Notch signalling patterns retinal composition by regulatingDevelopment (Cambridge, England) · 2018
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  14. Regulation ofDevelopment (Cambridge, England) · 2017
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 5 countries.

Patricia R JusufAustralian Regenerative Medicine Institute, Monash University, Victoria 3800, Australia.
Shahad Albadri
Alessio Paolini
Peter D Currie
Francesco Argenton
Shin-ichi Higashijima
William A Harris
Lucia Poggi
Heidelberg University · DEMonash University · AUNational Institute for Physiological Sciences · JPUniversity of Cambridge · GBUniversity of Padua · IT

Funding

Wellcome Trust 083203Wellcome Trust RG49253
6 · The paper itself

Abstract

Within the developing vertebrate retina, particular subtypes of amacrine cells (ACs) tend to arise from progenitors expressing the basic helix-loop-helix (bHLH) transcription factor, Atoh7, which is necessary for the early generation of retinal ganglion cells (RGCs). All ACs require the postmitotic expression of the bHLH pancreas transcription factor Ptf1a; however, Ptf1a alone is not sufficient to give subtype identities. Here we use functional and in vivo time-lapse studies in the zebrafish retina to investigate on the developmental programs leading to ACs specification within the subsequent divisions of Atoh7-positive progenitors. We find evidences that the homeobox transcription factor Barhl2 is an AC subtype identity-biasing factor that turns on within Atoh7-positive descendants. In vivo lineage tracing reveals that particular modes of cell division tend to generate Barhl2-positive precursors from sisters of RGCs. Additionally, Atoh7 indirectly impacts these division modes to regulate the right number of barhl2-expressing cells. We finally find that Atoh7 itself influences the subtypes of Barhl2-dependent ACs. Together, the results from our study uncover lineage-related and molecular logic of subtype specification in the vertebrate retina, by showing that specific AC subtypes arise via a particular mode of cell division and a transcriptional network cascade involving the sequential expression of first atoh7 followed by ptf1a and then barhl2.

Indexed as

Amacrine CellsAnimalsAnimals, Genetically ModifiedCell DivisionCell LineageDNA-Binding ProteinsFemaleGene Expression Regulation, DevelopmentalHelix-Loop-Helix MotifsMaleMorpholinosRetinaTime-Lapse ImagingTranscription FactorsTranscription, GeneticZebrafishatoh7 protein, zebrafishBarhl2 protein, zebrafishDNA-Binding ProteinsMorpholinostranscription factor PTF1Transcription FactorsZebrafish Proteins

Identifiers

PMID23035102
PMCPMC3475408
OpenAlexW2022863392

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.