Evidence map›Paper›PMID 23035094›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2012

Regulated vesicular trafficking of specific PCDH15 and VLGR1 variants in auditory hair cells.

Marisa Zallocchi, Duane Delimont, Daniel T Meehan, Dominic Cosgrove

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.8field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
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  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Usher protein functions in hair cells and photoreceptors.The international journal of biochemistry & cell biology · 2014
    Review
  14. Article
  15. The very large G protein coupled receptor (Vlgr1) in hair cells.Journal of molecular neuroscience : MN · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Marisa ZallocchiBoys Town National Research Hospital, Omaha, Nebraska 68131, USA.
Duane Delimont
Daniel T Meehan
Dominic Cosgrove
Boys Town National Research Hospital · USNebraska Medical Center · US

Funding

UNMC Structural Biology CoreP20GM103427 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Heather Colleen Jensen-Smith · 2012 to 2026
$59.2M
ZINC FINGER-INSPIRED FLUORESCENT CHEMOSENSORSP20RR016469 · NCRR · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI TURPEN, JAMES B · 2001 to 2011
$36.2M
TRANSGENIC EXPRESSION ANALYSIS OF MIRNA-144P20RR018788 · NCRR · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI NYSTUEN, ARNE M · 2003 to 2011
$16.5M
USHERIN: STRUCTURAL AND FUNCTIONAL ANALYSISR01DC004844 · NIDCD · FATHER FLANAGAN'S BOYS'HOME · PI COSGROVE, DOMINIC E. · 2002 to 2012
$2.8M
NCRR NIH HHS 5P20RR016469NCRR NIH HHS 5 P20 RR018788-08NCRR NIH HHS P20 RR016469NCRR NIH HHS P20 RR018788NIDCD NIH HHS R01 DC004844NIGMS NIH HHS 8P20GM103427NIGMS NIH HHS P20 GM103427
6 · The paper itself

Abstract

Usher syndrome is a genetically heterogeneous disorder characterized by hearing and balance dysfunction and progressive retinitis pigmentosa. Mouse models carrying mutations for the nine Usher-associated genes have splayed stereocilia, and some show delayed maturation of ribbon synapses suggesting these proteins may play different roles in terminal differentiation of auditory hair cells. The presence of the Usher proteins at the basal and apical aspects of the neurosensory epithelia suggests the existence of regulated trafficking through specific transport proteins and routes. Immature mouse cochleae and UB/OC-1 cells were used in this work to address whether specific variants of PCDH15 and VLGR1 are being selectively transported to opposite poles of the hair cells. Confocal colocalization studies between apical and basal vesicular markers and the different PCDH15 and VLGR1 variants along with sucrose density gradients and the use of vesicle trafficking inhibitors show the existence of Usher protein complexes in at least two vesicular subpools. The apically trafficked pool colocalized with the early endosomal vesicle marker, rab5, while the basally trafficked pool associated with membrane microdomains and SNAP25. Moreover, coimmunoprecipitation experiments between SNAP25 and VLGR1 show a physical interaction of these two proteins in organ of Corti and brain. Collectively, these findings establish the existence of a differential vesicular trafficking mechanism for specific Usher protein variants in mouse cochlear hair cells, with the apical variants playing a potential role in endosomal recycling and stereocilia development/maintenance, and the basolateral variants involved in vesicle docking and/or fusion through SNAP25-mediated interactions.

Indexed as

ADP-Ribosylation Factor 1AnimalsBrain ChemistryCadherin Related ProteinsCadherinsCell CompartmentationCell DifferentiationCell PolarityDisease Models, AnimalGene Knockdown TechniquesHair Cells, AuditoryImmunoprecipitationMiceMice, Neurologic MutantsMutationOrgan of CortiAdgrv1 protein, mouseADP-Ribosylation Factor 1Cadherin Related ProteinsCadherinsCDHR15 protein, mouseProtein Precursorsrab5 GTP-Binding ProteinsReceptors, G-Protein-CoupledSnap25 protein, mouseSynaptosomal-Associated Protein 25

Identifiers

PMID23035094
PMCPMC3505989
OpenAlexW2054816070

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.